Gene : Bradi3g06450 B. distachyon v3.1
Defline:  (1 of 2) PTHR10799:SF620 - DEFECTIVE CHORION-1 PROTEIN, FC177 ISOFORM Genomic Order:  801
Name:  ? Bradi3g06450 Secondary Identifier:  ? PAC:32820254
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g06450 0.5kb upstream 0.5kb upstream 13261 true Bd3: 4662439-4675699 Brachypodium distachyon
Bradi3g06450 0.5kb upstream 0.5kb upstream 500 false Bd3: 4675200-4675699 Brachypodium distachyon
Bradi3g06450 0.5kb downstream 0.5kb downstream 13261 true Bd3: 4661939-4675199 Brachypodium distachyon
Bradi3g06450 0.5kb downstream 0.5kb downstream 500 false Bd3: 4661939-4662438 Brachypodium distachyon
Bradi3g06450 1.0kb upstream 1.0kb upstream 13761 true Bd3: 4662439-4676199 Brachypodium distachyon
Bradi3g06450 1.0kb upstream 1.0kb upstream 1000 false Bd3: 4675200-4676199 Brachypodium distachyon
Bradi3g06450 1.0kb downstream 1.0kb downstream 13761 true Bd3: 4661439-4675199 Brachypodium distachyon
Bradi3g06450 1.0kb downstream 1.0kb downstream 1000 false Bd3: 4661439-4662438 Brachypodium distachyon
Bradi3g06450 2.0kb upstream 2.0kb upstream 14761 true Bd3: 4662439-4677199 Brachypodium distachyon
Bradi3g06450 2.0kb upstream 2.0kb upstream 2000 false Bd3: 4675200-4677199 Brachypodium distachyon
Bradi3g06450 2.0kb downstream 2.0kb downstream 14761 true Bd3: 4660439-4675199 Brachypodium distachyon
Bradi3g06450 2.0kb downstream 2.0kb downstream 2000 false Bd3: 4660439-4662438 Brachypodium distachyon
Bradi3g06450 5.0kb upstream 5.0kb upstream 17761 true Bd3: 4662439-4680199 Brachypodium distachyon
Bradi3g06450 5.0kb upstream 5.0kb upstream 5000 false Bd3: 4675200-4680199 Brachypodium distachyon
Bradi3g06450 5.0kb downstream 5.0kb downstream 17761 true Bd3: 4657439-4675199 Brachypodium distachyon
Bradi3g06450 5.0kb downstream 5.0kb downstream 5000 false Bd3: 4657439-4662438 Brachypodium distachyon
Bradi3g06450 10.0kb upstream 10.0kb upstream 22761 true Bd3: 4662439-4685199 Brachypodium distachyon
Bradi3g06450 10.0kb upstream 10.0kb upstream 10000 false Bd3: 4675200-4685199 Brachypodium distachyon
Bradi3g06450 10.0kb downstream 10.0kb downstream 22761 true Bd3: 4652439-4675199 Brachypodium distachyon
Bradi3g06450 10.0kb downstream 10.0kb downstream 10000 false Bd3: 4652439-4662438 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586739 5269 Grass View MSA
122043248 5273 Angiosperm View MSA
121351152 5274 Embryophyte View MSA
123382029 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low Low
cufflinks 0.042     Low High
cufflinks 0.047     Low High
cufflinks 0.031     Low  
cufflinks 0.002     Low Low
cufflinks 0.031     Low  
cufflinks 0.035     Low  
cufflinks 0.015     Low  
cufflinks 0.03     Low  
cufflinks 0.01     Low  
cufflinks 0.048     Low High
cufflinks 0.034     Low  
cufflinks 0.02     Low  
cufflinks 0.01     Low  
cufflinks 0.006     Low Low
cufflinks 0.031     Low  
cufflinks 0.015     Low  
cufflinks 0.043     Low High
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.054     Low High
cufflinks 0.016     Low  
cufflinks 0.023     Low  
cufflinks 0.029     Low  
cufflinks 0.045     Low High
cufflinks 0.037     Low  
cufflinks 0.024     Low  
cufflinks 0.04     Low  
cufflinks 0.025     Low  

0 Strain