Gene : Bradi4g43810 B. distachyon v3.1
Defline:  (1 of 1) KOG4718 - Non-SMC (structural maintenance of chromosomes) element 1 protein (NSE1) Genomic Order:  5644
Name:  ? Bradi4g43810 Secondary Identifier:  ? PAC:32786212
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g43810 0.5kb upstream 0.5kb upstream 3351 true Bd4: 47317734-47321084 Brachypodium distachyon
Bradi4g43810 0.5kb upstream 0.5kb upstream 500 false Bd4: 47317734-47318233 Brachypodium distachyon
Bradi4g43810 0.5kb downstream 0.5kb downstream 3351 true Bd4: 47318234-47321584 Brachypodium distachyon
Bradi4g43810 0.5kb downstream 0.5kb downstream 500 false Bd4: 47321085-47321584 Brachypodium distachyon
Bradi4g43810 1.0kb upstream 1.0kb upstream 3851 true Bd4: 47317234-47321084 Brachypodium distachyon
Bradi4g43810 1.0kb upstream 1.0kb upstream 1000 false Bd4: 47317234-47318233 Brachypodium distachyon
Bradi4g43810 1.0kb downstream 1.0kb downstream 3851 true Bd4: 47318234-47322084 Brachypodium distachyon
Bradi4g43810 1.0kb downstream 1.0kb downstream 1000 false Bd4: 47321085-47322084 Brachypodium distachyon
Bradi4g43810 2.0kb upstream 2.0kb upstream 4851 true Bd4: 47316234-47321084 Brachypodium distachyon
Bradi4g43810 2.0kb upstream 2.0kb upstream 2000 false Bd4: 47316234-47318233 Brachypodium distachyon
Bradi4g43810 2.0kb downstream 2.0kb downstream 4851 true Bd4: 47318234-47323084 Brachypodium distachyon
Bradi4g43810 2.0kb downstream 2.0kb downstream 2000 false Bd4: 47321085-47323084 Brachypodium distachyon
Bradi4g43810 5.0kb upstream 5.0kb upstream 7851 true Bd4: 47313234-47321084 Brachypodium distachyon
Bradi4g43810 5.0kb upstream 5.0kb upstream 5000 false Bd4: 47313234-47318233 Brachypodium distachyon
Bradi4g43810 5.0kb downstream 5.0kb downstream 7851 true Bd4: 47318234-47326084 Brachypodium distachyon
Bradi4g43810 5.0kb downstream 5.0kb downstream 5000 false Bd4: 47321085-47326084 Brachypodium distachyon
Bradi4g43810 10.0kb upstream 10.0kb upstream 12851 true Bd4: 47308234-47321084 Brachypodium distachyon
Bradi4g43810 10.0kb upstream 10.0kb upstream 10000 false Bd4: 47308234-47318233 Brachypodium distachyon
Bradi4g43810 10.0kb downstream 10.0kb downstream 12851 true Bd4: 47318234-47331084 Brachypodium distachyon
Bradi4g43810 10.0kb downstream 10.0kb downstream 10000 false Bd4: 47321085-47331084 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576490 5269 Grass View MSA
122042015 5273 Angiosperm View MSA
121350451 5274 Embryophyte View MSA
123426397 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.817        
cufflinks 1.436        
cufflinks 1.339        
cufflinks 1.257        
cufflinks 0.511        
cufflinks 1.145        
cufflinks 1.354        
cufflinks 1.021        
cufflinks 1.246        
cufflinks 0.651        
cufflinks 0.356        
cufflinks 0.86        
cufflinks 0.163       Low
cufflinks 0.197       Low
cufflinks 0.211       Low
cufflinks 1.026        
cufflinks 1.076        
cufflinks 1.835       High
cufflinks 0.853        
cufflinks 0.098     Low Low
cufflinks 0.92        
cufflinks 1.124        
cufflinks 0.916        
cufflinks 0.826        
cufflinks 1.22        
cufflinks 1.073        
cufflinks 0.148       Low
cufflinks 1.117        
cufflinks 0.941        
cufflinks 1.325        

0 Strain