Gene : Bradi3g12950 B. distachyon v3.1

Defline:  (1 of 2) PTHR12385//PTHR12385:SF47 - CTL TRANSPORTER Genomic Order:  1597
Name:  ? Bradi3g12950 Secondary Identifier:  ? PAC:32813655

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g12950 0.5kb upstream 0.5kb upstream 5031 true Bd3: 11626774-11631804 Brachypodium distachyon
Bradi3g12950 0.5kb upstream 0.5kb upstream 500 false Bd3: 11626774-11627273 Brachypodium distachyon
Bradi3g12950 0.5kb downstream 0.5kb downstream 5031 true Bd3: 11627274-11632304 Brachypodium distachyon
Bradi3g12950 0.5kb downstream 0.5kb downstream 500 false Bd3: 11631805-11632304 Brachypodium distachyon
Bradi3g12950 1.0kb upstream 1.0kb upstream 5531 true Bd3: 11626274-11631804 Brachypodium distachyon
Bradi3g12950 1.0kb upstream 1.0kb upstream 1000 false Bd3: 11626274-11627273 Brachypodium distachyon
Bradi3g12950 1.0kb downstream 1.0kb downstream 5531 true Bd3: 11627274-11632804 Brachypodium distachyon
Bradi3g12950 1.0kb downstream 1.0kb downstream 1000 false Bd3: 11631805-11632804 Brachypodium distachyon
Bradi3g12950 2.0kb upstream 2.0kb upstream 6531 true Bd3: 11625274-11631804 Brachypodium distachyon
Bradi3g12950 2.0kb upstream 2.0kb upstream 2000 false Bd3: 11625274-11627273 Brachypodium distachyon
Bradi3g12950 2.0kb downstream 2.0kb downstream 6531 true Bd3: 11627274-11633804 Brachypodium distachyon
Bradi3g12950 2.0kb downstream 2.0kb downstream 2000 false Bd3: 11631805-11633804 Brachypodium distachyon
Bradi3g12950 5.0kb upstream 5.0kb upstream 9531 true Bd3: 11622274-11631804 Brachypodium distachyon
Bradi3g12950 5.0kb upstream 5.0kb upstream 5000 false Bd3: 11622274-11627273 Brachypodium distachyon
Bradi3g12950 5.0kb downstream 5.0kb downstream 9531 true Bd3: 11627274-11636804 Brachypodium distachyon
Bradi3g12950 5.0kb downstream 5.0kb downstream 5000 false Bd3: 11631805-11636804 Brachypodium distachyon
Bradi3g12950 10.0kb upstream 10.0kb upstream 14531 true Bd3: 11617274-11631804 Brachypodium distachyon
Bradi3g12950 10.0kb upstream 10.0kb upstream 10000 false Bd3: 11617274-11627273 Brachypodium distachyon
Bradi3g12950 10.0kb downstream 10.0kb downstream 14531 true Bd3: 11627274-11641804 Brachypodium distachyon
Bradi3g12950 10.0kb downstream 10.0kb downstream 10000 false Bd3: 11631805-11641804 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124545082 5269 Grass View MSA
122045224 5273 Angiosperm View MSA
121347248 5274 Embryophyte View MSA
123428295 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.338        
cufflinks 7.115        
cufflinks 6.802        
cufflinks 5.459        
cufflinks 2.607        
cufflinks 6.598        
cufflinks 5.903        
cufflinks 5.786        
cufflinks 6.809        
cufflinks 3.902        
cufflinks 4.716        
cufflinks 6.211        
cufflinks 1.425       Low
cufflinks 0.855       Low
cufflinks 2.388        
cufflinks 7.038        
cufflinks 4.576        
cufflinks 6.811        
cufflinks 4.289        
cufflinks 0.371       Low
cufflinks 9.051       High
cufflinks 6.834        
cufflinks 5.235        
cufflinks 5.818        
cufflinks 5.632        
cufflinks 5.362        
cufflinks 0.729       Low
cufflinks 4.724        
cufflinks 5.604        
cufflinks 10.725       High

0 Strain