Gene : Bradi3g13130 B. distachyon v3.1
Defline:  (1 of 2) PF14770 - Transmembrane protein 18 (TMEM18) Genomic Order:  1619
Name:  ? Bradi3g13130 Secondary Identifier:  ? PAC:32818920
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g13130 0.5kb upstream 0.5kb upstream 2014 true Bd3: 11728097-11730110 Brachypodium distachyon
Bradi3g13130 0.5kb upstream 0.5kb upstream 500 false Bd3: 11729611-11730110 Brachypodium distachyon
Bradi3g13130 0.5kb downstream 0.5kb downstream 2014 true Bd3: 11727597-11729610 Brachypodium distachyon
Bradi3g13130 0.5kb downstream 0.5kb downstream 500 false Bd3: 11727597-11728096 Brachypodium distachyon
Bradi3g13130 1.0kb upstream 1.0kb upstream 2514 true Bd3: 11728097-11730610 Brachypodium distachyon
Bradi3g13130 1.0kb upstream 1.0kb upstream 1000 false Bd3: 11729611-11730610 Brachypodium distachyon
Bradi3g13130 1.0kb downstream 1.0kb downstream 2514 true Bd3: 11727097-11729610 Brachypodium distachyon
Bradi3g13130 1.0kb downstream 1.0kb downstream 1000 false Bd3: 11727097-11728096 Brachypodium distachyon
Bradi3g13130 2.0kb upstream 2.0kb upstream 3514 true Bd3: 11728097-11731610 Brachypodium distachyon
Bradi3g13130 2.0kb upstream 2.0kb upstream 2000 false Bd3: 11729611-11731610 Brachypodium distachyon
Bradi3g13130 2.0kb downstream 2.0kb downstream 3514 true Bd3: 11726097-11729610 Brachypodium distachyon
Bradi3g13130 2.0kb downstream 2.0kb downstream 2000 false Bd3: 11726097-11728096 Brachypodium distachyon
Bradi3g13130 5.0kb upstream 5.0kb upstream 6514 true Bd3: 11728097-11734610 Brachypodium distachyon
Bradi3g13130 5.0kb upstream 5.0kb upstream 5000 false Bd3: 11729611-11734610 Brachypodium distachyon
Bradi3g13130 5.0kb downstream 5.0kb downstream 6514 true Bd3: 11723097-11729610 Brachypodium distachyon
Bradi3g13130 5.0kb downstream 5.0kb downstream 5000 false Bd3: 11723097-11728096 Brachypodium distachyon
Bradi3g13130 10.0kb upstream 10.0kb upstream 11514 true Bd3: 11728097-11739610 Brachypodium distachyon
Bradi3g13130 10.0kb upstream 10.0kb upstream 10000 false Bd3: 11729611-11739610 Brachypodium distachyon
Bradi3g13130 10.0kb downstream 10.0kb downstream 11514 true Bd3: 11718097-11729610 Brachypodium distachyon
Bradi3g13130 10.0kb downstream 10.0kb downstream 10000 false Bd3: 11718097-11728096 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571933 5269 Grass View MSA
122046427 5273 Angiosperm View MSA
121346161 5274 Embryophyte View MSA
123424935 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.917        
cufflinks 5.682        
cufflinks 4.929        
cufflinks 7.092        
cufflinks 4.692        
cufflinks 5.001        
cufflinks 4.686        
cufflinks 3.494        
cufflinks 5.18        
cufflinks 6.048        
cufflinks 1.838       Low
cufflinks 3.693        
cufflinks 1.381       Low
cufflinks 2.021       Low
cufflinks 3.589        
cufflinks 4.968        
cufflinks 5.374        
cufflinks 11.273       High
cufflinks 7.132        
cufflinks 3.161        
cufflinks 15.463     High High
cufflinks 3.825        
cufflinks 5.096        
cufflinks 5.202        
cufflinks 6.754        
cufflinks 6.795        
cufflinks 1.874       Low
cufflinks 7.795        
cufflinks 6.388        
cufflinks 9.057       High

0 Strain