Gene : Bradi3g13880 B. distachyon v3.1
Defline:  (1 of 1) PTHR31096:SF6 - ACR7-RELATED Genomic Order:  1714
Name:  ? Bradi3g13880 Secondary Identifier:  ? PAC:32821596
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g13880 0.5kb upstream 0.5kb upstream 2706 true Bd3: 12376321-12379026 Brachypodium distachyon
Bradi3g13880 0.5kb upstream 0.5kb upstream 500 false Bd3: 12378527-12379026 Brachypodium distachyon
Bradi3g13880 0.5kb downstream 0.5kb downstream 2706 true Bd3: 12375821-12378526 Brachypodium distachyon
Bradi3g13880 0.5kb downstream 0.5kb downstream 500 false Bd3: 12375821-12376320 Brachypodium distachyon
Bradi3g13880 1.0kb upstream 1.0kb upstream 3206 true Bd3: 12376321-12379526 Brachypodium distachyon
Bradi3g13880 1.0kb upstream 1.0kb upstream 1000 false Bd3: 12378527-12379526 Brachypodium distachyon
Bradi3g13880 1.0kb downstream 1.0kb downstream 3206 true Bd3: 12375321-12378526 Brachypodium distachyon
Bradi3g13880 1.0kb downstream 1.0kb downstream 1000 false Bd3: 12375321-12376320 Brachypodium distachyon
Bradi3g13880 2.0kb upstream 2.0kb upstream 4206 true Bd3: 12376321-12380526 Brachypodium distachyon
Bradi3g13880 2.0kb upstream 2.0kb upstream 2000 false Bd3: 12378527-12380526 Brachypodium distachyon
Bradi3g13880 2.0kb downstream 2.0kb downstream 4206 true Bd3: 12374321-12378526 Brachypodium distachyon
Bradi3g13880 2.0kb downstream 2.0kb downstream 2000 false Bd3: 12374321-12376320 Brachypodium distachyon
Bradi3g13880 5.0kb upstream 5.0kb upstream 7206 true Bd3: 12376321-12383526 Brachypodium distachyon
Bradi3g13880 5.0kb upstream 5.0kb upstream 5000 false Bd3: 12378527-12383526 Brachypodium distachyon
Bradi3g13880 5.0kb downstream 5.0kb downstream 7206 true Bd3: 12371321-12378526 Brachypodium distachyon
Bradi3g13880 5.0kb downstream 5.0kb downstream 5000 false Bd3: 12371321-12376320 Brachypodium distachyon
Bradi3g13880 10.0kb upstream 10.0kb upstream 12206 true Bd3: 12376321-12388526 Brachypodium distachyon
Bradi3g13880 10.0kb upstream 10.0kb upstream 10000 false Bd3: 12378527-12388526 Brachypodium distachyon
Bradi3g13880 10.0kb downstream 10.0kb downstream 12206 true Bd3: 12366321-12378526 Brachypodium distachyon
Bradi3g13880 10.0kb downstream 10.0kb downstream 10000 false Bd3: 12366321-12376320 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586708 5269 Grass View MSA
122043779 5273 Angiosperm View MSA
121310188 5274 Embryophyte View MSA
123428468 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.139        
cufflinks 2.395        
cufflinks 2.144        
cufflinks 2.398        
cufflinks 1.59        
cufflinks 2.219        
cufflinks 2.052        
cufflinks 1.94        
cufflinks 2.238        
cufflinks 1.89        
cufflinks 0.032     Low Low
cufflinks 1.567        
cufflinks 0.058     Low Low
cufflinks 0.01     Low Low
cufflinks 0.492        
cufflinks 2.154        
cufflinks 3.047        
cufflinks 6.915       High
cufflinks 1.181        
cufflinks 0.947        
cufflinks 1.883        
cufflinks 1.942        
cufflinks 1.919        
cufflinks 1.997        
cufflinks 2.137        
cufflinks 2.085        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.328        
cufflinks 1.853        
cufflinks 4.429        

0 Strain