Gene : Bradi3g14221 B. distachyon v3.1
Defline:  (1 of 5) PF12056 - Protein of unknown function (DUF3537) (DUF3537) Genomic Order:  1759
Name:  ? Bradi3g14221 Secondary Identifier:  ? PAC:32818609
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g14221 0.5kb upstream 0.5kb upstream 3766 true Bd3: 12669330-12673095 Brachypodium distachyon
Bradi3g14221 0.5kb upstream 0.5kb upstream 500 false Bd3: 12669330-12669829 Brachypodium distachyon
Bradi3g14221 0.5kb downstream 0.5kb downstream 3766 true Bd3: 12669830-12673595 Brachypodium distachyon
Bradi3g14221 0.5kb downstream 0.5kb downstream 500 false Bd3: 12673096-12673595 Brachypodium distachyon
Bradi3g14221 1.0kb upstream 1.0kb upstream 4266 true Bd3: 12668830-12673095 Brachypodium distachyon
Bradi3g14221 1.0kb upstream 1.0kb upstream 1000 false Bd3: 12668830-12669829 Brachypodium distachyon
Bradi3g14221 1.0kb downstream 1.0kb downstream 4266 true Bd3: 12669830-12674095 Brachypodium distachyon
Bradi3g14221 1.0kb downstream 1.0kb downstream 1000 false Bd3: 12673096-12674095 Brachypodium distachyon
Bradi3g14221 2.0kb upstream 2.0kb upstream 5266 true Bd3: 12667830-12673095 Brachypodium distachyon
Bradi3g14221 2.0kb upstream 2.0kb upstream 2000 false Bd3: 12667830-12669829 Brachypodium distachyon
Bradi3g14221 2.0kb downstream 2.0kb downstream 5266 true Bd3: 12669830-12675095 Brachypodium distachyon
Bradi3g14221 2.0kb downstream 2.0kb downstream 2000 false Bd3: 12673096-12675095 Brachypodium distachyon
Bradi3g14221 5.0kb upstream 5.0kb upstream 8266 true Bd3: 12664830-12673095 Brachypodium distachyon
Bradi3g14221 5.0kb upstream 5.0kb upstream 5000 false Bd3: 12664830-12669829 Brachypodium distachyon
Bradi3g14221 5.0kb downstream 5.0kb downstream 8266 true Bd3: 12669830-12678095 Brachypodium distachyon
Bradi3g14221 5.0kb downstream 5.0kb downstream 5000 false Bd3: 12673096-12678095 Brachypodium distachyon
Bradi3g14221 10.0kb upstream 10.0kb upstream 13266 true Bd3: 12659830-12673095 Brachypodium distachyon
Bradi3g14221 10.0kb upstream 10.0kb upstream 10000 false Bd3: 12659830-12669829 Brachypodium distachyon
Bradi3g14221 10.0kb downstream 10.0kb downstream 13266 true Bd3: 12669830-12683095 Brachypodium distachyon
Bradi3g14221 10.0kb downstream 10.0kb downstream 10000 false Bd3: 12673096-12683095 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582583 5269 Grass View MSA
122045832 5273 Angiosperm View MSA
121310512 5274 Embryophyte View MSA
123347975 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.42        
cufflinks 1.3        
cufflinks 1.21       Low
cufflinks 1.242       Low
cufflinks 4.085       High
cufflinks 1.78        
cufflinks 1.576        
cufflinks 3.937       High
cufflinks 2.221        
cufflinks 2.733        
cufflinks 4.831       High
cufflinks 2.609        
cufflinks 3.252        
cufflinks 3.903       High
cufflinks 2.678        
cufflinks 1.439        
cufflinks 2.659        
cufflinks 0.999       Low
cufflinks 3.393        
cufflinks 3.601       High
cufflinks 1.361        
cufflinks 2.869        
cufflinks 4.522       High
cufflinks 2.95        
cufflinks 1.791        
cufflinks 1.138       Low
cufflinks 3.623       High
cufflinks 1.385        
cufflinks 1.772        
cufflinks 1.404        

0 Strain