Gene : Bradi3g15000 B. distachyon v3.1
Defline:  (1 of 3) K14191 - 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] (DIM1) Genomic Order:  1868
Name:  ? Bradi3g15000 Secondary Identifier:  ? PAC:32813853
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g15000 0.5kb upstream 0.5kb upstream 2624 true Bd3: 13313194-13315817 Brachypodium distachyon
Bradi3g15000 0.5kb upstream 0.5kb upstream 500 false Bd3: 13315318-13315817 Brachypodium distachyon
Bradi3g15000 0.5kb downstream 0.5kb downstream 2624 true Bd3: 13312694-13315317 Brachypodium distachyon
Bradi3g15000 0.5kb downstream 0.5kb downstream 500 false Bd3: 13312694-13313193 Brachypodium distachyon
Bradi3g15000 1.0kb upstream 1.0kb upstream 3124 true Bd3: 13313194-13316317 Brachypodium distachyon
Bradi3g15000 1.0kb upstream 1.0kb upstream 1000 false Bd3: 13315318-13316317 Brachypodium distachyon
Bradi3g15000 1.0kb downstream 1.0kb downstream 3124 true Bd3: 13312194-13315317 Brachypodium distachyon
Bradi3g15000 1.0kb downstream 1.0kb downstream 1000 false Bd3: 13312194-13313193 Brachypodium distachyon
Bradi3g15000 2.0kb upstream 2.0kb upstream 4124 true Bd3: 13313194-13317317 Brachypodium distachyon
Bradi3g15000 2.0kb upstream 2.0kb upstream 2000 false Bd3: 13315318-13317317 Brachypodium distachyon
Bradi3g15000 2.0kb downstream 2.0kb downstream 4124 true Bd3: 13311194-13315317 Brachypodium distachyon
Bradi3g15000 2.0kb downstream 2.0kb downstream 2000 false Bd3: 13311194-13313193 Brachypodium distachyon
Bradi3g15000 5.0kb upstream 5.0kb upstream 7124 true Bd3: 13313194-13320317 Brachypodium distachyon
Bradi3g15000 5.0kb upstream 5.0kb upstream 5000 false Bd3: 13315318-13320317 Brachypodium distachyon
Bradi3g15000 5.0kb downstream 5.0kb downstream 7124 true Bd3: 13308194-13315317 Brachypodium distachyon
Bradi3g15000 5.0kb downstream 5.0kb downstream 5000 false Bd3: 13308194-13313193 Brachypodium distachyon
Bradi3g15000 10.0kb upstream 10.0kb upstream 12124 true Bd3: 13313194-13325317 Brachypodium distachyon
Bradi3g15000 10.0kb upstream 10.0kb upstream 10000 false Bd3: 13315318-13325317 Brachypodium distachyon
Bradi3g15000 10.0kb downstream 10.0kb downstream 12124 true Bd3: 13303194-13315317 Brachypodium distachyon
Bradi3g15000 10.0kb downstream 10.0kb downstream 10000 false Bd3: 13303194-13313193 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577588 5269 Grass View MSA
122042142 5273 Angiosperm View MSA
121344705 5274 Embryophyte View MSA
123426456 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.099     High  
cufflinks 11.786     High  
cufflinks 9.975        
cufflinks 11.777     High  
cufflinks 5.588        
cufflinks 11.061     High  
cufflinks 10.83     High  
cufflinks 8.722        
cufflinks 9.444        
cufflinks 8.593        
cufflinks 3.168       Low
cufflinks 7.978        
cufflinks 2.048       Low
cufflinks 2.386       Low
cufflinks 5.232        
cufflinks 11.203     High  
cufflinks 10.502        
cufflinks 17.83     High High
cufflinks 12.053        
cufflinks 2.416       Low
cufflinks 13.982     High  
cufflinks 9.669        
cufflinks 7.982        
cufflinks 8.181        
cufflinks 11.756     High  
cufflinks 8.551        
cufflinks 2.552       Low
cufflinks 8.702        
cufflinks 9.094        
cufflinks 15.044     High High

0 Strain