Gene : Bradi4g42890 B. distachyon v3.1
Defline:  (1 of 1) PTHR11772:SF18 - ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS Genomic Order:  5532
Name:  ? Bradi4g42890 Secondary Identifier:  ? PAC:32786511
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g42890 0.5kb upstream 0.5kb upstream 4486 true Bd4: 46685283-46689768 Brachypodium distachyon
Bradi4g42890 0.5kb upstream 0.5kb upstream 500 false Bd4: 46685283-46685782 Brachypodium distachyon
Bradi4g42890 0.5kb downstream 0.5kb downstream 4486 true Bd4: 46685783-46690268 Brachypodium distachyon
Bradi4g42890 0.5kb downstream 0.5kb downstream 500 false Bd4: 46689769-46690268 Brachypodium distachyon
Bradi4g42890 1.0kb upstream 1.0kb upstream 4986 true Bd4: 46684783-46689768 Brachypodium distachyon
Bradi4g42890 1.0kb upstream 1.0kb upstream 1000 false Bd4: 46684783-46685782 Brachypodium distachyon
Bradi4g42890 1.0kb downstream 1.0kb downstream 4986 true Bd4: 46685783-46690768 Brachypodium distachyon
Bradi4g42890 1.0kb downstream 1.0kb downstream 1000 false Bd4: 46689769-46690768 Brachypodium distachyon
Bradi4g42890 2.0kb upstream 2.0kb upstream 5986 true Bd4: 46683783-46689768 Brachypodium distachyon
Bradi4g42890 2.0kb upstream 2.0kb upstream 2000 false Bd4: 46683783-46685782 Brachypodium distachyon
Bradi4g42890 2.0kb downstream 2.0kb downstream 5986 true Bd4: 46685783-46691768 Brachypodium distachyon
Bradi4g42890 2.0kb downstream 2.0kb downstream 2000 false Bd4: 46689769-46691768 Brachypodium distachyon
Bradi4g42890 5.0kb upstream 5.0kb upstream 8986 true Bd4: 46680783-46689768 Brachypodium distachyon
Bradi4g42890 5.0kb upstream 5.0kb upstream 5000 false Bd4: 46680783-46685782 Brachypodium distachyon
Bradi4g42890 5.0kb downstream 5.0kb downstream 8986 true Bd4: 46685783-46694768 Brachypodium distachyon
Bradi4g42890 5.0kb downstream 5.0kb downstream 5000 false Bd4: 46689769-46694768 Brachypodium distachyon
Bradi4g42890 10.0kb upstream 10.0kb upstream 13986 true Bd4: 46675783-46689768 Brachypodium distachyon
Bradi4g42890 10.0kb upstream 10.0kb upstream 10000 false Bd4: 46675783-46685782 Brachypodium distachyon
Bradi4g42890 10.0kb downstream 10.0kb downstream 13986 true Bd4: 46685783-46699768 Brachypodium distachyon
Bradi4g42890 10.0kb downstream 10.0kb downstream 10000 false Bd4: 46689769-46699768 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580846 5269 Grass View MSA
122049991 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.074       Low
cufflinks 18.666     High  
cufflinks 37.872     High  
cufflinks 14.28     High Low
cufflinks 17.615     High  
cufflinks 30.22     High  
cufflinks 32.031     High  
cufflinks 15.339     High Low
cufflinks 27.101     High  
cufflinks 40.48     High  
cufflinks 42.574     High  
cufflinks 18.653     High  
cufflinks 39.428     High  
cufflinks 32.437     High  
cufflinks 10.472     High Low
cufflinks 24.481     High  
cufflinks 33.042     High  
cufflinks 20.429     High  
cufflinks 55.362     High High
cufflinks 44.577     High  
cufflinks 90.283     High High
cufflinks 22.596     High  
cufflinks 13.301     High Low
cufflinks 21.311     High  
cufflinks 28.218     High  
cufflinks 37.852     High  
cufflinks 100.427     High High
cufflinks 46.222     High  
cufflinks 33.631     High  
cufflinks 42.36     High  

0 Strain