Gene : Bradi4g42400 B. distachyon v3.1
Defline:  (1 of 1) PTHR11362:SF13 - PROTEIN TERMINAL FLOWER 1 Genomic Order:  5456
Name:  ? Bradi4g42400 Secondary Identifier:  ? PAC:32783042
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g42400 0.5kb upstream 0.5kb upstream 2101 true Bd4: 46351638-46353738 Brachypodium distachyon
Bradi4g42400 0.5kb upstream 0.5kb upstream 500 false Bd4: 46351638-46352137 Brachypodium distachyon
Bradi4g42400 0.5kb downstream 0.5kb downstream 2101 true Bd4: 46352138-46354238 Brachypodium distachyon
Bradi4g42400 0.5kb downstream 0.5kb downstream 500 false Bd4: 46353739-46354238 Brachypodium distachyon
Bradi4g42400 1.0kb upstream 1.0kb upstream 2601 true Bd4: 46351138-46353738 Brachypodium distachyon
Bradi4g42400 1.0kb upstream 1.0kb upstream 1000 false Bd4: 46351138-46352137 Brachypodium distachyon
Bradi4g42400 1.0kb downstream 1.0kb downstream 2601 true Bd4: 46352138-46354738 Brachypodium distachyon
Bradi4g42400 1.0kb downstream 1.0kb downstream 1000 false Bd4: 46353739-46354738 Brachypodium distachyon
Bradi4g42400 2.0kb upstream 2.0kb upstream 3601 true Bd4: 46350138-46353738 Brachypodium distachyon
Bradi4g42400 2.0kb upstream 2.0kb upstream 2000 false Bd4: 46350138-46352137 Brachypodium distachyon
Bradi4g42400 2.0kb downstream 2.0kb downstream 3601 true Bd4: 46352138-46355738 Brachypodium distachyon
Bradi4g42400 2.0kb downstream 2.0kb downstream 2000 false Bd4: 46353739-46355738 Brachypodium distachyon
Bradi4g42400 5.0kb upstream 5.0kb upstream 6601 true Bd4: 46347138-46353738 Brachypodium distachyon
Bradi4g42400 5.0kb upstream 5.0kb upstream 5000 false Bd4: 46347138-46352137 Brachypodium distachyon
Bradi4g42400 5.0kb downstream 5.0kb downstream 6601 true Bd4: 46352138-46358738 Brachypodium distachyon
Bradi4g42400 5.0kb downstream 5.0kb downstream 5000 false Bd4: 46353739-46358738 Brachypodium distachyon
Bradi4g42400 10.0kb upstream 10.0kb upstream 11601 true Bd4: 46342138-46353738 Brachypodium distachyon
Bradi4g42400 10.0kb upstream 10.0kb upstream 10000 false Bd4: 46342138-46352137 Brachypodium distachyon
Bradi4g42400 10.0kb downstream 10.0kb downstream 11601 true Bd4: 46352138-46363738 Brachypodium distachyon
Bradi4g42400 10.0kb downstream 10.0kb downstream 10000 false Bd4: 46353739-46363738 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590595 5269 Grass View MSA
122043822 5273 Angiosperm View MSA
123429087 5275 Viridiplantae View MSA
121348505 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.612        
cufflinks 2.32        
cufflinks 1.279        
cufflinks 2.877        
cufflinks 4.894       High
cufflinks 1.991        
cufflinks 2.592        
cufflinks 1.213        
cufflinks 1.904        
cufflinks 1.58        
cufflinks 0.108       Low
cufflinks 1.307        
cufflinks 0.155       Low
cufflinks 0.023     Low Low
cufflinks 0.586        
cufflinks 3.461        
cufflinks 0.822        
cufflinks 7.984       High
cufflinks 0.623        
cufflinks 5.65       High
cufflinks 28.596     High High
cufflinks 1.302        
cufflinks 1.162        
cufflinks 1.47        
cufflinks 1.976        
cufflinks 1.764        
cufflinks 0.294        
cufflinks 0.955        
cufflinks 1.377        
cufflinks 3.398        

0 Strain