Gene : Bradi3g12640 B. distachyon v3.1
Defline:  (1 of 1) K14821 - bud site selection protein 20 (BUD20) Genomic Order:  1558
Name:  ? Bradi3g12640 Secondary Identifier:  ? PAC:32821917
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g12640 0.5kb upstream 0.5kb upstream 2733 true Bd3: 11347074-11349806 Brachypodium distachyon
Bradi3g12640 0.5kb upstream 0.5kb upstream 500 false Bd3: 11349307-11349806 Brachypodium distachyon
Bradi3g12640 0.5kb downstream 0.5kb downstream 2733 true Bd3: 11346574-11349306 Brachypodium distachyon
Bradi3g12640 0.5kb downstream 0.5kb downstream 500 false Bd3: 11346574-11347073 Brachypodium distachyon
Bradi3g12640 1.0kb upstream 1.0kb upstream 3233 true Bd3: 11347074-11350306 Brachypodium distachyon
Bradi3g12640 1.0kb upstream 1.0kb upstream 1000 false Bd3: 11349307-11350306 Brachypodium distachyon
Bradi3g12640 1.0kb downstream 1.0kb downstream 3233 true Bd3: 11346074-11349306 Brachypodium distachyon
Bradi3g12640 1.0kb downstream 1.0kb downstream 1000 false Bd3: 11346074-11347073 Brachypodium distachyon
Bradi3g12640 2.0kb upstream 2.0kb upstream 4233 true Bd3: 11347074-11351306 Brachypodium distachyon
Bradi3g12640 2.0kb upstream 2.0kb upstream 2000 false Bd3: 11349307-11351306 Brachypodium distachyon
Bradi3g12640 2.0kb downstream 2.0kb downstream 4233 true Bd3: 11345074-11349306 Brachypodium distachyon
Bradi3g12640 2.0kb downstream 2.0kb downstream 2000 false Bd3: 11345074-11347073 Brachypodium distachyon
Bradi3g12640 5.0kb upstream 5.0kb upstream 7233 true Bd3: 11347074-11354306 Brachypodium distachyon
Bradi3g12640 5.0kb upstream 5.0kb upstream 5000 false Bd3: 11349307-11354306 Brachypodium distachyon
Bradi3g12640 5.0kb downstream 5.0kb downstream 7233 true Bd3: 11342074-11349306 Brachypodium distachyon
Bradi3g12640 5.0kb downstream 5.0kb downstream 5000 false Bd3: 11342074-11347073 Brachypodium distachyon
Bradi3g12640 10.0kb upstream 10.0kb upstream 12233 true Bd3: 11347074-11359306 Brachypodium distachyon
Bradi3g12640 10.0kb upstream 10.0kb upstream 10000 false Bd3: 11349307-11359306 Brachypodium distachyon
Bradi3g12640 10.0kb downstream 10.0kb downstream 12233 true Bd3: 11337074-11349306 Brachypodium distachyon
Bradi3g12640 10.0kb downstream 10.0kb downstream 10000 false Bd3: 11337074-11347073 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570755 5269 Grass View MSA
122041921 5273 Angiosperm View MSA
123428955 5275 Viridiplantae View MSA
121346205 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.192     High  
cufflinks 13.426     High  
cufflinks 13.955     High  
cufflinks 15.675     High  
cufflinks 13.51     High  
cufflinks 12.026     High  
cufflinks 16.031     High  
cufflinks 14.49     High  
cufflinks 13.055     High  
cufflinks 19.376     High  
cufflinks 11.558     High  
cufflinks 7.817       Low
cufflinks 7.179       Low
cufflinks 10.749     High  
cufflinks 9.635     High Low
cufflinks 12.912     High  
cufflinks 24.049     High High
cufflinks 21.129     High  
cufflinks 41.525     High High
cufflinks 31.028     High High
cufflinks 25.407     High High
cufflinks 14.263     High  
cufflinks 14.005     High  
cufflinks 14.317     High  
cufflinks 15.799     High  
cufflinks 16.393     High  
cufflinks 10.35     High Low
cufflinks 18.474     High  
cufflinks 16.058     High  
cufflinks 15.953     High  

0 Strain