Gene : Bradi3g12760 B. distachyon v3.1
Defline:  (1 of 1) PTHR10584//PTHR10584:SF190 - SUGAR KINASE // RIBOKINASE-RELATED Genomic Order:  1572
Name:  ? Bradi3g12760 Secondary Identifier:  ? PAC:32817109
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY66-373 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g12760 0.5kb upstream 0.5kb upstream 3998 true Bd3: 11454044-11458041 Brachypodium distachyon
Bradi3g12760 0.5kb upstream 0.5kb upstream 500 false Bd3: 11454044-11454543 Brachypodium distachyon
Bradi3g12760 0.5kb downstream 0.5kb downstream 3998 true Bd3: 11454544-11458541 Brachypodium distachyon
Bradi3g12760 0.5kb downstream 0.5kb downstream 500 false Bd3: 11458042-11458541 Brachypodium distachyon
Bradi3g12760 1.0kb upstream 1.0kb upstream 4498 true Bd3: 11453544-11458041 Brachypodium distachyon
Bradi3g12760 1.0kb upstream 1.0kb upstream 1000 false Bd3: 11453544-11454543 Brachypodium distachyon
Bradi3g12760 1.0kb downstream 1.0kb downstream 4498 true Bd3: 11454544-11459041 Brachypodium distachyon
Bradi3g12760 1.0kb downstream 1.0kb downstream 1000 false Bd3: 11458042-11459041 Brachypodium distachyon
Bradi3g12760 2.0kb upstream 2.0kb upstream 5498 true Bd3: 11452544-11458041 Brachypodium distachyon
Bradi3g12760 2.0kb upstream 2.0kb upstream 2000 false Bd3: 11452544-11454543 Brachypodium distachyon
Bradi3g12760 2.0kb downstream 2.0kb downstream 5498 true Bd3: 11454544-11460041 Brachypodium distachyon
Bradi3g12760 2.0kb downstream 2.0kb downstream 2000 false Bd3: 11458042-11460041 Brachypodium distachyon
Bradi3g12760 5.0kb upstream 5.0kb upstream 8498 true Bd3: 11449544-11458041 Brachypodium distachyon
Bradi3g12760 5.0kb upstream 5.0kb upstream 5000 false Bd3: 11449544-11454543 Brachypodium distachyon
Bradi3g12760 5.0kb downstream 5.0kb downstream 8498 true Bd3: 11454544-11463041 Brachypodium distachyon
Bradi3g12760 5.0kb downstream 5.0kb downstream 5000 false Bd3: 11458042-11463041 Brachypodium distachyon
Bradi3g12760 10.0kb upstream 10.0kb upstream 13498 true Bd3: 11444544-11458041 Brachypodium distachyon
Bradi3g12760 10.0kb upstream 10.0kb upstream 10000 false Bd3: 11444544-11454543 Brachypodium distachyon
Bradi3g12760 10.0kb downstream 10.0kb downstream 13498 true Bd3: 11454544-11468041 Brachypodium distachyon
Bradi3g12760 10.0kb downstream 10.0kb downstream 10000 false Bd3: 11458042-11468041 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570454 5269 Grass View MSA
122044169 5273 Angiosperm View MSA
121347285 5274 Embryophyte View MSA
123428634 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.752        
cufflinks 10.641     High High
cufflinks 10.818     High High
cufflinks 10.448     High High
cufflinks 6.372        
cufflinks 8.866        
cufflinks 9.378        
cufflinks 6.996        
cufflinks 7.436        
cufflinks 8.341        
cufflinks 9.351     High  
cufflinks 5.958        
cufflinks 6.335        
cufflinks 7.909     High  
cufflinks 6.135        
cufflinks 9.731     High  
cufflinks 9.604        
cufflinks 2.947       Low
cufflinks 7.511        
cufflinks 3.184       Low
cufflinks 5.957        
cufflinks 8.077        
cufflinks 6.526        
cufflinks 7.131        
cufflinks 8.348        
cufflinks 10.643       High
cufflinks 5.5        
cufflinks 10.473       High
cufflinks 10.04        
cufflinks 6.075        

0 Strain