Gene : Bradi3g18700 B. distachyon v3.1
Defline:  (1 of 1) K16584 - HAUS augmin-like complex subunit 1 (HAUS1) Genomic Order:  2390
Name:  ? Bradi3g18700 Secondary Identifier:  ? PAC:32819960
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g18700 0.5kb upstream 0.5kb upstream 6149 true Bd3: 17291847-17297995 Brachypodium distachyon
Bradi3g18700 0.5kb upstream 0.5kb upstream 500 false Bd3: 17297496-17297995 Brachypodium distachyon
Bradi3g18700 0.5kb downstream 0.5kb downstream 6149 true Bd3: 17291347-17297495 Brachypodium distachyon
Bradi3g18700 0.5kb downstream 0.5kb downstream 500 false Bd3: 17291347-17291846 Brachypodium distachyon
Bradi3g18700 1.0kb upstream 1.0kb upstream 6649 true Bd3: 17291847-17298495 Brachypodium distachyon
Bradi3g18700 1.0kb upstream 1.0kb upstream 1000 false Bd3: 17297496-17298495 Brachypodium distachyon
Bradi3g18700 1.0kb downstream 1.0kb downstream 6649 true Bd3: 17290847-17297495 Brachypodium distachyon
Bradi3g18700 1.0kb downstream 1.0kb downstream 1000 false Bd3: 17290847-17291846 Brachypodium distachyon
Bradi3g18700 2.0kb upstream 2.0kb upstream 7649 true Bd3: 17291847-17299495 Brachypodium distachyon
Bradi3g18700 2.0kb upstream 2.0kb upstream 2000 false Bd3: 17297496-17299495 Brachypodium distachyon
Bradi3g18700 2.0kb downstream 2.0kb downstream 7649 true Bd3: 17289847-17297495 Brachypodium distachyon
Bradi3g18700 2.0kb downstream 2.0kb downstream 2000 false Bd3: 17289847-17291846 Brachypodium distachyon
Bradi3g18700 5.0kb upstream 5.0kb upstream 10649 true Bd3: 17291847-17302495 Brachypodium distachyon
Bradi3g18700 5.0kb upstream 5.0kb upstream 5000 false Bd3: 17297496-17302495 Brachypodium distachyon
Bradi3g18700 5.0kb downstream 5.0kb downstream 10649 true Bd3: 17286847-17297495 Brachypodium distachyon
Bradi3g18700 5.0kb downstream 5.0kb downstream 5000 false Bd3: 17286847-17291846 Brachypodium distachyon
Bradi3g18700 10.0kb upstream 10.0kb upstream 15649 true Bd3: 17291847-17307495 Brachypodium distachyon
Bradi3g18700 10.0kb upstream 10.0kb upstream 10000 false Bd3: 17297496-17307495 Brachypodium distachyon
Bradi3g18700 10.0kb downstream 10.0kb downstream 15649 true Bd3: 17281847-17297495 Brachypodium distachyon
Bradi3g18700 10.0kb downstream 10.0kb downstream 10000 false Bd3: 17281847-17291846 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568944 5269 Grass View MSA
122046982 5273 Angiosperm View MSA
121344598 5274 Embryophyte View MSA
123426865 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.951        
cufflinks 0.962        
cufflinks 1.163        
cufflinks 1.246        
cufflinks 1.103        
cufflinks 0.883        
cufflinks 0.888        
cufflinks 0.919        
cufflinks 0.929        
cufflinks 2.104       High
cufflinks 0.543       Low
cufflinks 0.824        
cufflinks 0.6       Low
cufflinks 0.686       Low
cufflinks 0.882        
cufflinks 0.793        
cufflinks 1.403        
cufflinks 1.418        
cufflinks 1.282        
cufflinks 1.311        
cufflinks 1.765       High
cufflinks 1.125        
cufflinks 0.983        
cufflinks 0.869        
cufflinks 1.022        
cufflinks 1.808       High
cufflinks 0.822        
cufflinks 1.661       High
cufflinks 1.285        
cufflinks 1.586        

0 Strain