Gene : Bradi3g19210 B. distachyon v3.1
Defline:  (1 of 20) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  2468
Name:  ? Bradi3g19210 Secondary Identifier:  ? PAC:32813034
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g19210 0.5kb upstream 0.5kb upstream 5199 true Bd3: 17892901-17898099 Brachypodium distachyon
Bradi3g19210 0.5kb upstream 0.5kb upstream 500 false Bd3: 17897600-17898099 Brachypodium distachyon
Bradi3g19210 0.5kb downstream 0.5kb downstream 5199 true Bd3: 17892401-17897599 Brachypodium distachyon
Bradi3g19210 0.5kb downstream 0.5kb downstream 500 false Bd3: 17892401-17892900 Brachypodium distachyon
Bradi3g19210 1.0kb upstream 1.0kb upstream 5699 true Bd3: 17892901-17898599 Brachypodium distachyon
Bradi3g19210 1.0kb upstream 1.0kb upstream 1000 false Bd3: 17897600-17898599 Brachypodium distachyon
Bradi3g19210 1.0kb downstream 1.0kb downstream 5699 true Bd3: 17891901-17897599 Brachypodium distachyon
Bradi3g19210 1.0kb downstream 1.0kb downstream 1000 false Bd3: 17891901-17892900 Brachypodium distachyon
Bradi3g19210 2.0kb upstream 2.0kb upstream 6699 true Bd3: 17892901-17899599 Brachypodium distachyon
Bradi3g19210 2.0kb upstream 2.0kb upstream 2000 false Bd3: 17897600-17899599 Brachypodium distachyon
Bradi3g19210 2.0kb downstream 2.0kb downstream 6699 true Bd3: 17890901-17897599 Brachypodium distachyon
Bradi3g19210 2.0kb downstream 2.0kb downstream 2000 false Bd3: 17890901-17892900 Brachypodium distachyon
Bradi3g19210 5.0kb upstream 5.0kb upstream 9699 true Bd3: 17892901-17902599 Brachypodium distachyon
Bradi3g19210 5.0kb upstream 5.0kb upstream 5000 false Bd3: 17897600-17902599 Brachypodium distachyon
Bradi3g19210 5.0kb downstream 5.0kb downstream 9699 true Bd3: 17887901-17897599 Brachypodium distachyon
Bradi3g19210 5.0kb downstream 5.0kb downstream 5000 false Bd3: 17887901-17892900 Brachypodium distachyon
Bradi3g19210 10.0kb upstream 10.0kb upstream 14699 true Bd3: 17892901-17907599 Brachypodium distachyon
Bradi3g19210 10.0kb upstream 10.0kb upstream 10000 false Bd3: 17897600-17907599 Brachypodium distachyon
Bradi3g19210 10.0kb downstream 10.0kb downstream 14699 true Bd3: 17882901-17897599 Brachypodium distachyon
Bradi3g19210 10.0kb downstream 10.0kb downstream 10000 false Bd3: 17882901-17892900 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570453 5269 Grass View MSA
122049951 5273 Angiosperm View MSA
121351740 5274 Embryophyte View MSA
123382300 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.312        
cufflinks 2.993        
cufflinks 3.577        
cufflinks 3.007        
cufflinks 2.814        
cufflinks 2.615        
cufflinks 3.751        
cufflinks 2.751        
cufflinks 2.601        
cufflinks 3.869        
cufflinks 2.037        
cufflinks 1.921        
cufflinks 1.612       Low
cufflinks 1.529       Low
cufflinks 1.442       Low
cufflinks 2.665        
cufflinks 5.966       High
cufflinks 3.866        
cufflinks 9.77       High
cufflinks 1.63       Low
cufflinks 9.427       High
cufflinks 2.767        
cufflinks 2.939        
cufflinks 2.979        
cufflinks 3.125        
cufflinks 3.732        
cufflinks 2.6        
cufflinks 4.154        
cufflinks 3.833        
cufflinks 5.074        

0 Strain