Gene : Bradi3g19400 B. distachyon v3.1
Defline:  (1 of 1) K14721 - DNA-directed RNA polymerase III subunit RPC5 (RPC5, POLR3E) Genomic Order:  2496
Name:  ? Bradi3g19400 Secondary Identifier:  ? PAC:32819394
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g19400 0.5kb upstream 0.5kb upstream 16782 true Bd3: 18263016-18279797 Brachypodium distachyon
Bradi3g19400 0.5kb upstream 0.5kb upstream 500 false Bd3: 18263016-18263515 Brachypodium distachyon
Bradi3g19400 0.5kb downstream 0.5kb downstream 16782 true Bd3: 18263516-18280297 Brachypodium distachyon
Bradi3g19400 0.5kb downstream 0.5kb downstream 500 false Bd3: 18279798-18280297 Brachypodium distachyon
Bradi3g19400 1.0kb upstream 1.0kb upstream 17282 true Bd3: 18262516-18279797 Brachypodium distachyon
Bradi3g19400 1.0kb upstream 1.0kb upstream 1000 false Bd3: 18262516-18263515 Brachypodium distachyon
Bradi3g19400 1.0kb downstream 1.0kb downstream 17282 true Bd3: 18263516-18280797 Brachypodium distachyon
Bradi3g19400 1.0kb downstream 1.0kb downstream 1000 false Bd3: 18279798-18280797 Brachypodium distachyon
Bradi3g19400 2.0kb upstream 2.0kb upstream 18282 true Bd3: 18261516-18279797 Brachypodium distachyon
Bradi3g19400 2.0kb upstream 2.0kb upstream 2000 false Bd3: 18261516-18263515 Brachypodium distachyon
Bradi3g19400 2.0kb downstream 2.0kb downstream 18282 true Bd3: 18263516-18281797 Brachypodium distachyon
Bradi3g19400 2.0kb downstream 2.0kb downstream 2000 false Bd3: 18279798-18281797 Brachypodium distachyon
Bradi3g19400 5.0kb upstream 5.0kb upstream 21282 true Bd3: 18258516-18279797 Brachypodium distachyon
Bradi3g19400 5.0kb upstream 5.0kb upstream 5000 false Bd3: 18258516-18263515 Brachypodium distachyon
Bradi3g19400 5.0kb downstream 5.0kb downstream 21282 true Bd3: 18263516-18284797 Brachypodium distachyon
Bradi3g19400 5.0kb downstream 5.0kb downstream 5000 false Bd3: 18279798-18284797 Brachypodium distachyon
Bradi3g19400 10.0kb upstream 10.0kb upstream 26282 true Bd3: 18253516-18279797 Brachypodium distachyon
Bradi3g19400 10.0kb upstream 10.0kb upstream 10000 false Bd3: 18253516-18263515 Brachypodium distachyon
Bradi3g19400 10.0kb downstream 10.0kb downstream 26282 true Bd3: 18263516-18289797 Brachypodium distachyon
Bradi3g19400 10.0kb downstream 10.0kb downstream 10000 false Bd3: 18279798-18289797 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580329 5269 Grass View MSA
122041798 5273 Angiosperm View MSA
123429138 5275 Viridiplantae View MSA
121344108 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.22        
cufflinks 0.342        
cufflinks 0.347        
cufflinks 0.294        
cufflinks 0.155       Low
cufflinks 0.284        
cufflinks 0.308        
cufflinks 0.239        
cufflinks 0.254        
cufflinks 0.247        
cufflinks 0.32        
cufflinks 0.219        
cufflinks 0.21        
cufflinks 0.228        
cufflinks 0.19        
cufflinks 0.263        
cufflinks 0.236        
cufflinks 0.376       High
cufflinks 0.328        
cufflinks 0.122     Low Low
cufflinks 0.243        
cufflinks 0.281        
cufflinks 0.223        
cufflinks 0.254        
cufflinks 0.298        
cufflinks 0.347        
cufflinks 0.253        
cufflinks 0.323        
cufflinks 0.318        
cufflinks 0.274        

0 Strain