Gene : Bradi4g39150 B. distachyon v3.1
Defline:  (1 of 1) K12386 - cystinosin (CTNS) Genomic Order:  5040
Name:  ? Bradi4g39150 Secondary Identifier:  ? PAC:32788735
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g39150 0.5kb upstream 0.5kb upstream 5661 true Bd4: 43751061-43756721 Brachypodium distachyon
Bradi4g39150 0.5kb upstream 0.5kb upstream 500 false Bd4: 43751061-43751560 Brachypodium distachyon
Bradi4g39150 0.5kb downstream 0.5kb downstream 5661 true Bd4: 43751561-43757221 Brachypodium distachyon
Bradi4g39150 0.5kb downstream 0.5kb downstream 500 false Bd4: 43756722-43757221 Brachypodium distachyon
Bradi4g39150 1.0kb upstream 1.0kb upstream 6161 true Bd4: 43750561-43756721 Brachypodium distachyon
Bradi4g39150 1.0kb upstream 1.0kb upstream 1000 false Bd4: 43750561-43751560 Brachypodium distachyon
Bradi4g39150 1.0kb downstream 1.0kb downstream 6161 true Bd4: 43751561-43757721 Brachypodium distachyon
Bradi4g39150 1.0kb downstream 1.0kb downstream 1000 false Bd4: 43756722-43757721 Brachypodium distachyon
Bradi4g39150 2.0kb upstream 2.0kb upstream 7161 true Bd4: 43749561-43756721 Brachypodium distachyon
Bradi4g39150 2.0kb upstream 2.0kb upstream 2000 false Bd4: 43749561-43751560 Brachypodium distachyon
Bradi4g39150 2.0kb downstream 2.0kb downstream 7161 true Bd4: 43751561-43758721 Brachypodium distachyon
Bradi4g39150 2.0kb downstream 2.0kb downstream 2000 false Bd4: 43756722-43758721 Brachypodium distachyon
Bradi4g39150 5.0kb upstream 5.0kb upstream 10161 true Bd4: 43746561-43756721 Brachypodium distachyon
Bradi4g39150 5.0kb upstream 5.0kb upstream 5000 false Bd4: 43746561-43751560 Brachypodium distachyon
Bradi4g39150 5.0kb downstream 5.0kb downstream 10161 true Bd4: 43751561-43761721 Brachypodium distachyon
Bradi4g39150 5.0kb downstream 5.0kb downstream 5000 false Bd4: 43756722-43761721 Brachypodium distachyon
Bradi4g39150 10.0kb upstream 10.0kb upstream 15161 true Bd4: 43741561-43756721 Brachypodium distachyon
Bradi4g39150 10.0kb upstream 10.0kb upstream 10000 false Bd4: 43741561-43751560 Brachypodium distachyon
Bradi4g39150 10.0kb downstream 10.0kb downstream 15161 true Bd4: 43751561-43766721 Brachypodium distachyon
Bradi4g39150 10.0kb downstream 10.0kb downstream 10000 false Bd4: 43756722-43766721 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578500 5269 Grass View MSA
122043856 5273 Angiosperm View MSA
121344453 5274 Embryophyte View MSA
123380048 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.708        
cufflinks 8.563       High
cufflinks 3.326        
cufflinks 9.335       High
cufflinks 2.577       Low
cufflinks 8.63       High
cufflinks 7.791        
cufflinks 2.559       Low
cufflinks 4.178        
cufflinks 2.192       Low
cufflinks 6.996        
cufflinks 4.974        
cufflinks 6.771        
cufflinks 5.743        
cufflinks 3.2        
cufflinks 5.148        
cufflinks 4.556        
cufflinks 9.145       High
cufflinks 4.279        
cufflinks 2.383       Low
cufflinks 6.936        
cufflinks 2.263       Low
cufflinks 2.748       Low
cufflinks 5.534        
cufflinks 7.821        
cufflinks 4.937        
cufflinks 7.363        
cufflinks 3.344        
cufflinks 2.705       Low
cufflinks 6.956        

0 Strain