Gene : Bradi3g15607 B. distachyon v3.1
Defline:  (1 of 2) 6.3.2.5 - Phosphopantothenate--cysteine ligase / Phosphopantothenoylcysteine synthetase Genomic Order:  1955
Name:  ? Bradi3g15607 Secondary Identifier:  ? PAC:32819462
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon COA-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g15607 0.5kb upstream 0.5kb upstream 5016 true Bd3: 13912480-13917495 Brachypodium distachyon
Bradi3g15607 0.5kb upstream 0.5kb upstream 500 false Bd3: 13916996-13917495 Brachypodium distachyon
Bradi3g15607 0.5kb downstream 0.5kb downstream 5016 true Bd3: 13911980-13916995 Brachypodium distachyon
Bradi3g15607 0.5kb downstream 0.5kb downstream 500 false Bd3: 13911980-13912479 Brachypodium distachyon
Bradi3g15607 1.0kb upstream 1.0kb upstream 5516 true Bd3: 13912480-13917995 Brachypodium distachyon
Bradi3g15607 1.0kb upstream 1.0kb upstream 1000 false Bd3: 13916996-13917995 Brachypodium distachyon
Bradi3g15607 1.0kb downstream 1.0kb downstream 5516 true Bd3: 13911480-13916995 Brachypodium distachyon
Bradi3g15607 1.0kb downstream 1.0kb downstream 1000 false Bd3: 13911480-13912479 Brachypodium distachyon
Bradi3g15607 2.0kb upstream 2.0kb upstream 6516 true Bd3: 13912480-13918995 Brachypodium distachyon
Bradi3g15607 2.0kb upstream 2.0kb upstream 2000 false Bd3: 13916996-13918995 Brachypodium distachyon
Bradi3g15607 2.0kb downstream 2.0kb downstream 6516 true Bd3: 13910480-13916995 Brachypodium distachyon
Bradi3g15607 2.0kb downstream 2.0kb downstream 2000 false Bd3: 13910480-13912479 Brachypodium distachyon
Bradi3g15607 5.0kb upstream 5.0kb upstream 9516 true Bd3: 13912480-13921995 Brachypodium distachyon
Bradi3g15607 5.0kb upstream 5.0kb upstream 5000 false Bd3: 13916996-13921995 Brachypodium distachyon
Bradi3g15607 5.0kb downstream 5.0kb downstream 9516 true Bd3: 13907480-13916995 Brachypodium distachyon
Bradi3g15607 5.0kb downstream 5.0kb downstream 5000 false Bd3: 13907480-13912479 Brachypodium distachyon
Bradi3g15607 10.0kb upstream 10.0kb upstream 14516 true Bd3: 13912480-13926995 Brachypodium distachyon
Bradi3g15607 10.0kb upstream 10.0kb upstream 10000 false Bd3: 13916996-13926995 Brachypodium distachyon
Bradi3g15607 10.0kb downstream 10.0kb downstream 14516 true Bd3: 13902480-13916995 Brachypodium distachyon
Bradi3g15607 10.0kb downstream 10.0kb downstream 10000 false Bd3: 13902480-13912479 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570122 5269 Grass View MSA
122051236 5273 Angiosperm View MSA
121346014 5274 Embryophyte View MSA
123425902 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.573        
cufflinks 5.343        
cufflinks 6.518        
cufflinks 6.48        
cufflinks 4.044        
cufflinks 4.82        
cufflinks 4.331        
cufflinks 3.668       Low
cufflinks 4.678        
cufflinks 6.433        
cufflinks 3.191       Low
cufflinks 4.206        
cufflinks 3.791        
cufflinks 2.81       Low
cufflinks 3.782        
cufflinks 4.642        
cufflinks 4.65        
cufflinks 6.014        
cufflinks 5.758        
cufflinks 6.239        
cufflinks 9.405       High
cufflinks 5.602        
cufflinks 4.148        
cufflinks 4.924        
cufflinks 5.459        
cufflinks 7.749       High
cufflinks 3.572       Low
cufflinks 7.572       High
cufflinks 6.609        
cufflinks 7.406       High

0 Strain