Gene : Bradi3g16187 B. distachyon v3.1
Defline:  (1 of 5) PTHR17130 - MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25 Genomic Order:  2039
Name:  ? Bradi3g16187 Secondary Identifier:  ? PAC:32813579
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g16187 0.5kb upstream 0.5kb upstream 2985 true Bd3: 14357794-14360778 Brachypodium distachyon
Bradi3g16187 0.5kb upstream 0.5kb upstream 500 false Bd3: 14360279-14360778 Brachypodium distachyon
Bradi3g16187 0.5kb downstream 0.5kb downstream 2985 true Bd3: 14357294-14360278 Brachypodium distachyon
Bradi3g16187 0.5kb downstream 0.5kb downstream 500 false Bd3: 14357294-14357793 Brachypodium distachyon
Bradi3g16187 1.0kb upstream 1.0kb upstream 3485 true Bd3: 14357794-14361278 Brachypodium distachyon
Bradi3g16187 1.0kb upstream 1.0kb upstream 1000 false Bd3: 14360279-14361278 Brachypodium distachyon
Bradi3g16187 1.0kb downstream 1.0kb downstream 3485 true Bd3: 14356794-14360278 Brachypodium distachyon
Bradi3g16187 1.0kb downstream 1.0kb downstream 1000 false Bd3: 14356794-14357793 Brachypodium distachyon
Bradi3g16187 2.0kb upstream 2.0kb upstream 4485 true Bd3: 14357794-14362278 Brachypodium distachyon
Bradi3g16187 2.0kb upstream 2.0kb upstream 2000 false Bd3: 14360279-14362278 Brachypodium distachyon
Bradi3g16187 2.0kb downstream 2.0kb downstream 4485 true Bd3: 14355794-14360278 Brachypodium distachyon
Bradi3g16187 2.0kb downstream 2.0kb downstream 2000 false Bd3: 14355794-14357793 Brachypodium distachyon
Bradi3g16187 5.0kb upstream 5.0kb upstream 7485 true Bd3: 14357794-14365278 Brachypodium distachyon
Bradi3g16187 5.0kb upstream 5.0kb upstream 5000 false Bd3: 14360279-14365278 Brachypodium distachyon
Bradi3g16187 5.0kb downstream 5.0kb downstream 7485 true Bd3: 14352794-14360278 Brachypodium distachyon
Bradi3g16187 5.0kb downstream 5.0kb downstream 5000 false Bd3: 14352794-14357793 Brachypodium distachyon
Bradi3g16187 10.0kb upstream 10.0kb upstream 12485 true Bd3: 14357794-14370278 Brachypodium distachyon
Bradi3g16187 10.0kb upstream 10.0kb upstream 10000 false Bd3: 14360279-14370278 Brachypodium distachyon
Bradi3g16187 10.0kb downstream 10.0kb downstream 12485 true Bd3: 14347794-14360278 Brachypodium distachyon
Bradi3g16187 10.0kb downstream 10.0kb downstream 10000 false Bd3: 14347794-14357793 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569941 5269 Grass View MSA
122043639 5273 Angiosperm View MSA
121349762 5274 Embryophyte View MSA
123424471 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 248.68     High  
cufflinks 114.407     High  
cufflinks 126.987     High  
cufflinks 183.774     High  
cufflinks 239.318     High  
cufflinks 135.425     High  
cufflinks 126.317     High  
cufflinks 143.962     High  
cufflinks 143.498     High  
cufflinks 202.584     High  
cufflinks 222.05     High  
cufflinks 122.183     High  
cufflinks 212.381     High  
cufflinks 276.979     High  
cufflinks 290.34     High  
cufflinks 122.245     High  
cufflinks 233.04     High  
cufflinks 1.556       Low
cufflinks 95.619     High  
cufflinks 162.159     High  
cufflinks 71.48     High  
cufflinks 113.832     High  
cufflinks 167.002     High  
cufflinks 169.131     High  
cufflinks 176.205     High  
cufflinks 175.289     High  
cufflinks 219.321     High  
cufflinks 187.58     High  
cufflinks 184.947     High  
cufflinks 35.73     High Low

0 Strain