Gene : Bradi3g16170 B. distachyon v3.1
Defline:  (1 of 2) PTHR11722 - 60S RIBOSOMAL PROTEIN L13 Genomic Order:  2036
Name:  ? Bradi3g16170 Secondary Identifier:  ? PAC:32814714
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g16170 0.5kb upstream 0.5kb upstream 3248 true Bd3: 14349890-14353137 Brachypodium distachyon
Bradi3g16170 0.5kb upstream 0.5kb upstream 500 false Bd3: 14349890-14350389 Brachypodium distachyon
Bradi3g16170 0.5kb downstream 0.5kb downstream 3248 true Bd3: 14350390-14353637 Brachypodium distachyon
Bradi3g16170 0.5kb downstream 0.5kb downstream 500 false Bd3: 14353138-14353637 Brachypodium distachyon
Bradi3g16170 1.0kb upstream 1.0kb upstream 3748 true Bd3: 14349390-14353137 Brachypodium distachyon
Bradi3g16170 1.0kb upstream 1.0kb upstream 1000 false Bd3: 14349390-14350389 Brachypodium distachyon
Bradi3g16170 1.0kb downstream 1.0kb downstream 3748 true Bd3: 14350390-14354137 Brachypodium distachyon
Bradi3g16170 1.0kb downstream 1.0kb downstream 1000 false Bd3: 14353138-14354137 Brachypodium distachyon
Bradi3g16170 2.0kb upstream 2.0kb upstream 4748 true Bd3: 14348390-14353137 Brachypodium distachyon
Bradi3g16170 2.0kb upstream 2.0kb upstream 2000 false Bd3: 14348390-14350389 Brachypodium distachyon
Bradi3g16170 2.0kb downstream 2.0kb downstream 4748 true Bd3: 14350390-14355137 Brachypodium distachyon
Bradi3g16170 2.0kb downstream 2.0kb downstream 2000 false Bd3: 14353138-14355137 Brachypodium distachyon
Bradi3g16170 5.0kb upstream 5.0kb upstream 7748 true Bd3: 14345390-14353137 Brachypodium distachyon
Bradi3g16170 5.0kb upstream 5.0kb upstream 5000 false Bd3: 14345390-14350389 Brachypodium distachyon
Bradi3g16170 5.0kb downstream 5.0kb downstream 7748 true Bd3: 14350390-14358137 Brachypodium distachyon
Bradi3g16170 5.0kb downstream 5.0kb downstream 5000 false Bd3: 14353138-14358137 Brachypodium distachyon
Bradi3g16170 10.0kb upstream 10.0kb upstream 12748 true Bd3: 14340390-14353137 Brachypodium distachyon
Bradi3g16170 10.0kb upstream 10.0kb upstream 10000 false Bd3: 14340390-14350389 Brachypodium distachyon
Bradi3g16170 10.0kb downstream 10.0kb downstream 12748 true Bd3: 14350390-14363137 Brachypodium distachyon
Bradi3g16170 10.0kb downstream 10.0kb downstream 10000 false Bd3: 14353138-14363137 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570467 5269 Grass View MSA
122049765 5273 Angiosperm View MSA
121344371 5274 Embryophyte View MSA
123426358 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 116.515     High  
cufflinks 112.775     High  
cufflinks 110.106     High  
cufflinks 111.088     High  
cufflinks 102.226     High  
cufflinks 101.553     High  
cufflinks 106.219     High  
cufflinks 84.773     High  
cufflinks 90.234     High  
cufflinks 100.243     High  
cufflinks 31.284     High Low
cufflinks 86.718     High  
cufflinks 24.856     High Low
cufflinks 27.961     High Low
cufflinks 55.337     High Low
cufflinks 96.726     High  
cufflinks 138.21     High  
cufflinks 153.221     High High
cufflinks 123.717     High  
cufflinks 98.751     High  
cufflinks 137.062     High  
cufflinks 83.498     High  
cufflinks 79.564     High  
cufflinks 78.381     High  
cufflinks 103.885     High  
cufflinks 101.533     High  
cufflinks 29.84     High Low
cufflinks 106.684     High  
cufflinks 100.642     High  
cufflinks 138.666     High  

0 Strain