Gene : Bradi3g24740 B. distachyon v3.1
Defline:  (1 of 2) PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Genomic Order:  3043
Name:  ? Bradi3g24740 Secondary Identifier:  ? PAC:32822608
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g24740 0.5kb upstream 0.5kb upstream 4508 true Bd3: 24505482-24509989 Brachypodium distachyon
Bradi3g24740 0.5kb upstream 0.5kb upstream 500 false Bd3: 24509490-24509989 Brachypodium distachyon
Bradi3g24740 0.5kb downstream 0.5kb downstream 4508 true Bd3: 24504982-24509489 Brachypodium distachyon
Bradi3g24740 0.5kb downstream 0.5kb downstream 500 false Bd3: 24504982-24505481 Brachypodium distachyon
Bradi3g24740 1.0kb upstream 1.0kb upstream 5008 true Bd3: 24505482-24510489 Brachypodium distachyon
Bradi3g24740 1.0kb upstream 1.0kb upstream 1000 false Bd3: 24509490-24510489 Brachypodium distachyon
Bradi3g24740 1.0kb downstream 1.0kb downstream 5008 true Bd3: 24504482-24509489 Brachypodium distachyon
Bradi3g24740 1.0kb downstream 1.0kb downstream 1000 false Bd3: 24504482-24505481 Brachypodium distachyon
Bradi3g24740 2.0kb upstream 2.0kb upstream 6008 true Bd3: 24505482-24511489 Brachypodium distachyon
Bradi3g24740 2.0kb upstream 2.0kb upstream 2000 false Bd3: 24509490-24511489 Brachypodium distachyon
Bradi3g24740 2.0kb downstream 2.0kb downstream 6008 true Bd3: 24503482-24509489 Brachypodium distachyon
Bradi3g24740 2.0kb downstream 2.0kb downstream 2000 false Bd3: 24503482-24505481 Brachypodium distachyon
Bradi3g24740 5.0kb upstream 5.0kb upstream 9008 true Bd3: 24505482-24514489 Brachypodium distachyon
Bradi3g24740 5.0kb upstream 5.0kb upstream 5000 false Bd3: 24509490-24514489 Brachypodium distachyon
Bradi3g24740 5.0kb downstream 5.0kb downstream 9008 true Bd3: 24500482-24509489 Brachypodium distachyon
Bradi3g24740 5.0kb downstream 5.0kb downstream 5000 false Bd3: 24500482-24505481 Brachypodium distachyon
Bradi3g24740 10.0kb upstream 10.0kb upstream 14008 true Bd3: 24505482-24519489 Brachypodium distachyon
Bradi3g24740 10.0kb upstream 10.0kb upstream 10000 false Bd3: 24509490-24519489 Brachypodium distachyon
Bradi3g24740 10.0kb downstream 10.0kb downstream 14008 true Bd3: 24495482-24509489 Brachypodium distachyon
Bradi3g24740 10.0kb downstream 10.0kb downstream 10000 false Bd3: 24495482-24505481 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573978 5269 Grass View MSA
122046626 5273 Angiosperm View MSA
121346435 5274 Embryophyte View MSA
123380384 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.463        
cufflinks 2.807        
cufflinks 2.741        
cufflinks 2.668        
cufflinks 3.062        
cufflinks 2.158        
cufflinks 2.242        
cufflinks 2.138        
cufflinks 2.308        
cufflinks 2.596        
cufflinks 1.446       Low
cufflinks 2.405        
cufflinks 1.183       Low
cufflinks 0.982       Low
cufflinks 1.913        
cufflinks 2.605        
cufflinks 2.354        
cufflinks 6.109       High
cufflinks 3.745        
cufflinks 11.623     High High
cufflinks 3.423        
cufflinks 2.721        
cufflinks 2.142        
cufflinks 2.447        
cufflinks 2.371        
cufflinks 3.438        
cufflinks 1.277       Low
cufflinks 2.825        
cufflinks 2.405        
cufflinks 4.845       High

0 Strain