Gene : Bradi3g20207 B. distachyon v3.1
Defline:  (1 of 1) PTHR31096:SF21 - ACT DOMAIN-CONTAINING PROTEIN Genomic Order:  2610
Name:  ? Bradi3g20207 Secondary Identifier:  ? PAC:32816113
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g20207 0.5kb upstream 0.5kb upstream 6705 true Bd3: 19318290-19324994 Brachypodium distachyon
Bradi3g20207 0.5kb upstream 0.5kb upstream 500 false Bd3: 19324495-19324994 Brachypodium distachyon
Bradi3g20207 0.5kb downstream 0.5kb downstream 6705 true Bd3: 19317790-19324494 Brachypodium distachyon
Bradi3g20207 0.5kb downstream 0.5kb downstream 500 false Bd3: 19317790-19318289 Brachypodium distachyon
Bradi3g20207 1.0kb upstream 1.0kb upstream 7205 true Bd3: 19318290-19325494 Brachypodium distachyon
Bradi3g20207 1.0kb upstream 1.0kb upstream 1000 false Bd3: 19324495-19325494 Brachypodium distachyon
Bradi3g20207 1.0kb downstream 1.0kb downstream 7205 true Bd3: 19317290-19324494 Brachypodium distachyon
Bradi3g20207 1.0kb downstream 1.0kb downstream 1000 false Bd3: 19317290-19318289 Brachypodium distachyon
Bradi3g20207 2.0kb upstream 2.0kb upstream 8205 true Bd3: 19318290-19326494 Brachypodium distachyon
Bradi3g20207 2.0kb upstream 2.0kb upstream 2000 false Bd3: 19324495-19326494 Brachypodium distachyon
Bradi3g20207 2.0kb downstream 2.0kb downstream 8205 true Bd3: 19316290-19324494 Brachypodium distachyon
Bradi3g20207 2.0kb downstream 2.0kb downstream 2000 false Bd3: 19316290-19318289 Brachypodium distachyon
Bradi3g20207 5.0kb upstream 5.0kb upstream 11205 true Bd3: 19318290-19329494 Brachypodium distachyon
Bradi3g20207 5.0kb upstream 5.0kb upstream 5000 false Bd3: 19324495-19329494 Brachypodium distachyon
Bradi3g20207 5.0kb downstream 5.0kb downstream 11205 true Bd3: 19313290-19324494 Brachypodium distachyon
Bradi3g20207 5.0kb downstream 5.0kb downstream 5000 false Bd3: 19313290-19318289 Brachypodium distachyon
Bradi3g20207 10.0kb upstream 10.0kb upstream 16205 true Bd3: 19318290-19334494 Brachypodium distachyon
Bradi3g20207 10.0kb upstream 10.0kb upstream 10000 false Bd3: 19324495-19334494 Brachypodium distachyon
Bradi3g20207 10.0kb downstream 10.0kb downstream 16205 true Bd3: 19308290-19324494 Brachypodium distachyon
Bradi3g20207 10.0kb downstream 10.0kb downstream 10000 false Bd3: 19308290-19318289 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026657 5273 Angiosperm View MSA
124545489 5269 Grass View MSA
121296457 5274 Embryophyte View MSA
123334616 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.138       Low
cufflinks 0.36        
cufflinks 0.301        
cufflinks 0.274        
cufflinks 0.531       High
cufflinks 0.274        
cufflinks 0.317        
cufflinks 0.243        
cufflinks 0.276        
cufflinks 0.203        
cufflinks 0.331        
cufflinks 0.303        
cufflinks 0.255        
cufflinks 0.284        
cufflinks 0.215        
cufflinks 0.278        
cufflinks 0.218        
cufflinks 0.095     Low Low
cufflinks 0.493       High
cufflinks 0.203        
cufflinks 0.165       Low
cufflinks 0.293        
cufflinks 0.346        
cufflinks 0.287        
cufflinks 0.31        
cufflinks 0.312        
cufflinks 0.175        
cufflinks 0.303        
cufflinks 0.3        
cufflinks 0.267        

0 Strain