Gene : Bradi3g20590 B. distachyon v3.1
Defline:  (1 of 1) 6.3.5.2 - GMP synthase (glutamine-hydrolyzing) / GMP synthetase (glutamine-hydrolyzing) Genomic Order:  2635
Name:  ? Bradi3g20590 Secondary Identifier:  ? PAC:32818340
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon CITRULBIO-PWY Brachypodium distachyon pathologic  
Bdistachyon GLUTAMINDEG-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-7221 Brachypodium distachyon pathologic  
Bdistachyon PWY-7228 Brachypodium distachyon pathologic  
Bdistachyon PWY-841 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g20590 0.5kb upstream 0.5kb upstream 4446 true Bd3: 19632915-19637360 Brachypodium distachyon
Bradi3g20590 0.5kb upstream 0.5kb upstream 500 false Bd3: 19636861-19637360 Brachypodium distachyon
Bradi3g20590 0.5kb downstream 0.5kb downstream 4446 true Bd3: 19632415-19636860 Brachypodium distachyon
Bradi3g20590 0.5kb downstream 0.5kb downstream 500 false Bd3: 19632415-19632914 Brachypodium distachyon
Bradi3g20590 1.0kb upstream 1.0kb upstream 4946 true Bd3: 19632915-19637860 Brachypodium distachyon
Bradi3g20590 1.0kb upstream 1.0kb upstream 1000 false Bd3: 19636861-19637860 Brachypodium distachyon
Bradi3g20590 1.0kb downstream 1.0kb downstream 4946 true Bd3: 19631915-19636860 Brachypodium distachyon
Bradi3g20590 1.0kb downstream 1.0kb downstream 1000 false Bd3: 19631915-19632914 Brachypodium distachyon
Bradi3g20590 2.0kb upstream 2.0kb upstream 5946 true Bd3: 19632915-19638860 Brachypodium distachyon
Bradi3g20590 2.0kb upstream 2.0kb upstream 2000 false Bd3: 19636861-19638860 Brachypodium distachyon
Bradi3g20590 2.0kb downstream 2.0kb downstream 5946 true Bd3: 19630915-19636860 Brachypodium distachyon
Bradi3g20590 2.0kb downstream 2.0kb downstream 2000 false Bd3: 19630915-19632914 Brachypodium distachyon
Bradi3g20590 5.0kb upstream 5.0kb upstream 8946 true Bd3: 19632915-19641860 Brachypodium distachyon
Bradi3g20590 5.0kb upstream 5.0kb upstream 5000 false Bd3: 19636861-19641860 Brachypodium distachyon
Bradi3g20590 5.0kb downstream 5.0kb downstream 8946 true Bd3: 19627915-19636860 Brachypodium distachyon
Bradi3g20590 5.0kb downstream 5.0kb downstream 5000 false Bd3: 19627915-19632914 Brachypodium distachyon
Bradi3g20590 10.0kb upstream 10.0kb upstream 13946 true Bd3: 19632915-19646860 Brachypodium distachyon
Bradi3g20590 10.0kb upstream 10.0kb upstream 10000 false Bd3: 19636861-19646860 Brachypodium distachyon
Bradi3g20590 10.0kb downstream 10.0kb downstream 13946 true Bd3: 19622915-19636860 Brachypodium distachyon
Bradi3g20590 10.0kb downstream 10.0kb downstream 10000 false Bd3: 19622915-19632914 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579776 5269 Grass View MSA
122049121 5273 Angiosperm View MSA
121346337 5274 Embryophyte View MSA
123424284 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.144        
cufflinks 19.594     High High
cufflinks 12.639     High  
cufflinks 16.064     High  
cufflinks 3.437       Low
cufflinks 13.966     High  
cufflinks 16.131     High  
cufflinks 7.923        
cufflinks 10.472     High  
cufflinks 5.49        
cufflinks 4.326        
cufflinks 8.94        
cufflinks 2.591       Low
cufflinks 3.113       Low
cufflinks 2.244       Low
cufflinks 13.234     High  
cufflinks 10.475        
cufflinks 25.805     High High
cufflinks 12.46        
cufflinks 2.555       Low
cufflinks 12.11     High  
cufflinks 7.653        
cufflinks 6.529        
cufflinks 8.975        
cufflinks 15.461     High  
cufflinks 8.461        
cufflinks 3.992        
cufflinks 6.237        
cufflinks 6.688        
cufflinks 13.214     High  

0 Strain