Gene : Bradi3g20690 B. distachyon v3.1
Defline:  (1 of 1) KOG4760 - Uncharacterized conserved protein Genomic Order:  2650
Name:  ? Bradi3g20690 Secondary Identifier:  ? PAC:32815167
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g20690 0.5kb upstream 0.5kb upstream 3844 true Bd3: 19744402-19748245 Brachypodium distachyon
Bradi3g20690 0.5kb upstream 0.5kb upstream 500 false Bd3: 19744402-19744901 Brachypodium distachyon
Bradi3g20690 0.5kb downstream 0.5kb downstream 3844 true Bd3: 19744902-19748745 Brachypodium distachyon
Bradi3g20690 0.5kb downstream 0.5kb downstream 500 false Bd3: 19748246-19748745 Brachypodium distachyon
Bradi3g20690 1.0kb upstream 1.0kb upstream 4344 true Bd3: 19743902-19748245 Brachypodium distachyon
Bradi3g20690 1.0kb upstream 1.0kb upstream 1000 false Bd3: 19743902-19744901 Brachypodium distachyon
Bradi3g20690 1.0kb downstream 1.0kb downstream 4344 true Bd3: 19744902-19749245 Brachypodium distachyon
Bradi3g20690 1.0kb downstream 1.0kb downstream 1000 false Bd3: 19748246-19749245 Brachypodium distachyon
Bradi3g20690 2.0kb upstream 2.0kb upstream 5344 true Bd3: 19742902-19748245 Brachypodium distachyon
Bradi3g20690 2.0kb upstream 2.0kb upstream 2000 false Bd3: 19742902-19744901 Brachypodium distachyon
Bradi3g20690 2.0kb downstream 2.0kb downstream 5344 true Bd3: 19744902-19750245 Brachypodium distachyon
Bradi3g20690 2.0kb downstream 2.0kb downstream 2000 false Bd3: 19748246-19750245 Brachypodium distachyon
Bradi3g20690 5.0kb upstream 5.0kb upstream 8344 true Bd3: 19739902-19748245 Brachypodium distachyon
Bradi3g20690 5.0kb upstream 5.0kb upstream 5000 false Bd3: 19739902-19744901 Brachypodium distachyon
Bradi3g20690 5.0kb downstream 5.0kb downstream 8344 true Bd3: 19744902-19753245 Brachypodium distachyon
Bradi3g20690 5.0kb downstream 5.0kb downstream 5000 false Bd3: 19748246-19753245 Brachypodium distachyon
Bradi3g20690 10.0kb upstream 10.0kb upstream 13344 true Bd3: 19734902-19748245 Brachypodium distachyon
Bradi3g20690 10.0kb upstream 10.0kb upstream 10000 false Bd3: 19734902-19744901 Brachypodium distachyon
Bradi3g20690 10.0kb downstream 10.0kb downstream 13344 true Bd3: 19744902-19758245 Brachypodium distachyon
Bradi3g20690 10.0kb downstream 10.0kb downstream 10000 false Bd3: 19748246-19758245 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040903 5273 Angiosperm View MSA
124576836 5269 Grass View MSA
121344438 5274 Embryophyte View MSA
123426878 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.643        
cufflinks 10.688     High  
cufflinks 11.114     High  
cufflinks 12.398     High  
cufflinks 12.005     High  
cufflinks 10.627     High  
cufflinks 10.506     High  
cufflinks 12.58     High  
cufflinks 12.246     High  
cufflinks 10.325        
cufflinks 12.985     High  
cufflinks 11.184     High  
cufflinks 13.844     High  
cufflinks 12.545     High  
cufflinks 10.826     High  
cufflinks 10.213     High  
cufflinks 9.456        
cufflinks 4.057       Low
cufflinks 11.501        
cufflinks 2.56       Low
cufflinks 4.735       Low
cufflinks 11.603     High  
cufflinks 13.764     High  
cufflinks 12.387     High  
cufflinks 12.099     High  
cufflinks 12.043     High  
cufflinks 14.172     High High
cufflinks 11.556     High  
cufflinks 10.849     High  
cufflinks 5.631       Low

0 Strain