Gene : Bradi3g21640 B. distachyon v3.1
Defline:  (1 of 1) PTHR11819 - SODIUM/SOLUTE SYMPORTER Genomic Order:  2788
Name:  ? Bradi3g21640 Secondary Identifier:  ? PAC:32823693
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g21640 0.5kb upstream 0.5kb upstream 3549 true Bd3: 20818471-20822019 Brachypodium distachyon
Bradi3g21640 0.5kb upstream 0.5kb upstream 500 false Bd3: 20821520-20822019 Brachypodium distachyon
Bradi3g21640 0.5kb downstream 0.5kb downstream 3549 true Bd3: 20817971-20821519 Brachypodium distachyon
Bradi3g21640 0.5kb downstream 0.5kb downstream 500 false Bd3: 20817971-20818470 Brachypodium distachyon
Bradi3g21640 1.0kb upstream 1.0kb upstream 4049 true Bd3: 20818471-20822519 Brachypodium distachyon
Bradi3g21640 1.0kb upstream 1.0kb upstream 1000 false Bd3: 20821520-20822519 Brachypodium distachyon
Bradi3g21640 1.0kb downstream 1.0kb downstream 4049 true Bd3: 20817471-20821519 Brachypodium distachyon
Bradi3g21640 1.0kb downstream 1.0kb downstream 1000 false Bd3: 20817471-20818470 Brachypodium distachyon
Bradi3g21640 2.0kb upstream 2.0kb upstream 5049 true Bd3: 20818471-20823519 Brachypodium distachyon
Bradi3g21640 2.0kb upstream 2.0kb upstream 2000 false Bd3: 20821520-20823519 Brachypodium distachyon
Bradi3g21640 2.0kb downstream 2.0kb downstream 5049 true Bd3: 20816471-20821519 Brachypodium distachyon
Bradi3g21640 2.0kb downstream 2.0kb downstream 2000 false Bd3: 20816471-20818470 Brachypodium distachyon
Bradi3g21640 5.0kb upstream 5.0kb upstream 8049 true Bd3: 20818471-20826519 Brachypodium distachyon
Bradi3g21640 5.0kb upstream 5.0kb upstream 5000 false Bd3: 20821520-20826519 Brachypodium distachyon
Bradi3g21640 5.0kb downstream 5.0kb downstream 8049 true Bd3: 20813471-20821519 Brachypodium distachyon
Bradi3g21640 5.0kb downstream 5.0kb downstream 5000 false Bd3: 20813471-20818470 Brachypodium distachyon
Bradi3g21640 10.0kb upstream 10.0kb upstream 13049 true Bd3: 20818471-20831519 Brachypodium distachyon
Bradi3g21640 10.0kb upstream 10.0kb upstream 10000 false Bd3: 20821520-20831519 Brachypodium distachyon
Bradi3g21640 10.0kb downstream 10.0kb downstream 13049 true Bd3: 20808471-20821519 Brachypodium distachyon
Bradi3g21640 10.0kb downstream 10.0kb downstream 10000 false Bd3: 20808471-20818470 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579893 5269 Grass View MSA
122046935 5273 Angiosperm View MSA
121346289 5274 Embryophyte View MSA
123427439 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.075     Low  
cufflinks 0.06     Low  
cufflinks 0.062     Low  
cufflinks 0.054     Low  
cufflinks 0.019     Low Low
cufflinks 0.153        
cufflinks 0.061     Low  
cufflinks 0.185        
cufflinks 0.14        
cufflinks 0.031     Low Low
cufflinks 0.139        
cufflinks 0.095        
cufflinks 0.22        
cufflinks 0.116        
cufflinks 0.12        
cufflinks 0.124        
cufflinks 0.142     Low  
cufflinks 0.063     Low  
cufflinks 0.022     Low Low
cufflinks 0.046     Low  
cufflinks 0.277       High
cufflinks 0.031     Low Low
cufflinks 0.111        
cufflinks 0.3       High
cufflinks 0.225        
cufflinks 0.097     Low  
cufflinks 2.301       High
cufflinks 0.06     Low  
cufflinks 0.031     Low Low
cufflinks 0.119     Low  

0 Strain