Gene : Bradi3g22044 B. distachyon v3.1
Defline:  (1 of 19) PF04195 - Putative gypsy type transposon (Transposase_28) Genomic Order:  2824
Name:  ? Bradi3g22044 Secondary Identifier:  ? PAC:32823669
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g22044 0.5kb upstream 0.5kb upstream 1506 true Bd3: 21192996-21194501 Brachypodium distachyon
Bradi3g22044 0.5kb upstream 0.5kb upstream 500 false Bd3: 21192996-21193495 Brachypodium distachyon
Bradi3g22044 0.5kb downstream 0.5kb downstream 1506 true Bd3: 21193496-21195001 Brachypodium distachyon
Bradi3g22044 0.5kb downstream 0.5kb downstream 500 false Bd3: 21194502-21195001 Brachypodium distachyon
Bradi3g22044 1.0kb upstream 1.0kb upstream 2006 true Bd3: 21192496-21194501 Brachypodium distachyon
Bradi3g22044 1.0kb upstream 1.0kb upstream 1000 false Bd3: 21192496-21193495 Brachypodium distachyon
Bradi3g22044 1.0kb downstream 1.0kb downstream 2006 true Bd3: 21193496-21195501 Brachypodium distachyon
Bradi3g22044 1.0kb downstream 1.0kb downstream 1000 false Bd3: 21194502-21195501 Brachypodium distachyon
Bradi3g22044 2.0kb upstream 2.0kb upstream 3006 true Bd3: 21191496-21194501 Brachypodium distachyon
Bradi3g22044 2.0kb upstream 2.0kb upstream 2000 false Bd3: 21191496-21193495 Brachypodium distachyon
Bradi3g22044 2.0kb downstream 2.0kb downstream 3006 true Bd3: 21193496-21196501 Brachypodium distachyon
Bradi3g22044 2.0kb downstream 2.0kb downstream 2000 false Bd3: 21194502-21196501 Brachypodium distachyon
Bradi3g22044 5.0kb upstream 5.0kb upstream 6006 true Bd3: 21188496-21194501 Brachypodium distachyon
Bradi3g22044 5.0kb upstream 5.0kb upstream 5000 false Bd3: 21188496-21193495 Brachypodium distachyon
Bradi3g22044 5.0kb downstream 5.0kb downstream 6006 true Bd3: 21193496-21199501 Brachypodium distachyon
Bradi3g22044 5.0kb downstream 5.0kb downstream 5000 false Bd3: 21194502-21199501 Brachypodium distachyon
Bradi3g22044 10.0kb upstream 10.0kb upstream 11006 true Bd3: 21183496-21194501 Brachypodium distachyon
Bradi3g22044 10.0kb upstream 10.0kb upstream 10000 false Bd3: 21183496-21193495 Brachypodium distachyon
Bradi3g22044 10.0kb downstream 10.0kb downstream 11006 true Bd3: 21193496-21204501 Brachypodium distachyon
Bradi3g22044 10.0kb downstream 10.0kb downstream 10000 false Bd3: 21194502-21204501 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121996241 5273 Angiosperm View MSA
124591012 5269 Grass View MSA
121266409 5274 Embryophyte View MSA
123304751 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain