Gene : Bradi3g22290 B. distachyon v3.1
Defline:  (1 of 19) PF00249//PF14379 - Myb-like DNA-binding domain (Myb_DNA-binding) // MYB-CC type transfactor, LHEQLE motif (Myb_CC_LHEQLE) Genomic Order:  2838
Name:  ? Bradi3g22290 Secondary Identifier:  ? PAC:32821794
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g22290 0.5kb upstream 0.5kb upstream 7572 true Bd3: 21365701-21373272 Brachypodium distachyon
Bradi3g22290 0.5kb upstream 0.5kb upstream 500 false Bd3: 21372773-21373272 Brachypodium distachyon
Bradi3g22290 0.5kb downstream 0.5kb downstream 7572 true Bd3: 21365201-21372772 Brachypodium distachyon
Bradi3g22290 0.5kb downstream 0.5kb downstream 500 false Bd3: 21365201-21365700 Brachypodium distachyon
Bradi3g22290 1.0kb upstream 1.0kb upstream 8072 true Bd3: 21365701-21373772 Brachypodium distachyon
Bradi3g22290 1.0kb upstream 1.0kb upstream 1000 false Bd3: 21372773-21373772 Brachypodium distachyon
Bradi3g22290 1.0kb downstream 1.0kb downstream 8072 true Bd3: 21364701-21372772 Brachypodium distachyon
Bradi3g22290 1.0kb downstream 1.0kb downstream 1000 false Bd3: 21364701-21365700 Brachypodium distachyon
Bradi3g22290 2.0kb upstream 2.0kb upstream 9072 true Bd3: 21365701-21374772 Brachypodium distachyon
Bradi3g22290 2.0kb upstream 2.0kb upstream 2000 false Bd3: 21372773-21374772 Brachypodium distachyon
Bradi3g22290 2.0kb downstream 2.0kb downstream 9072 true Bd3: 21363701-21372772 Brachypodium distachyon
Bradi3g22290 2.0kb downstream 2.0kb downstream 2000 false Bd3: 21363701-21365700 Brachypodium distachyon
Bradi3g22290 5.0kb upstream 5.0kb upstream 12072 true Bd3: 21365701-21377772 Brachypodium distachyon
Bradi3g22290 5.0kb upstream 5.0kb upstream 5000 false Bd3: 21372773-21377772 Brachypodium distachyon
Bradi3g22290 5.0kb downstream 5.0kb downstream 12072 true Bd3: 21360701-21372772 Brachypodium distachyon
Bradi3g22290 5.0kb downstream 5.0kb downstream 5000 false Bd3: 21360701-21365700 Brachypodium distachyon
Bradi3g22290 10.0kb upstream 10.0kb upstream 17072 true Bd3: 21365701-21382772 Brachypodium distachyon
Bradi3g22290 10.0kb upstream 10.0kb upstream 10000 false Bd3: 21372773-21382772 Brachypodium distachyon
Bradi3g22290 10.0kb downstream 10.0kb downstream 17072 true Bd3: 21355701-21372772 Brachypodium distachyon
Bradi3g22290 10.0kb downstream 10.0kb downstream 10000 false Bd3: 21355701-21365700 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587373 5269 Grass View MSA
122045611 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349882 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.136        
cufflinks 0.209        
cufflinks 0.185        
cufflinks 0.256        
cufflinks 0.126        
cufflinks 0.191        
cufflinks 0.171        
cufflinks 0.2        
cufflinks 0.173        
cufflinks 0.224        
cufflinks 0.069       Low
cufflinks 0.167        
cufflinks 0.062       Low
cufflinks 0.068       Low
cufflinks 0.112        
cufflinks 0.164        
cufflinks 0.326       High
cufflinks 0.339       High
cufflinks 0.16     Low  
cufflinks 0.022     Low Low
cufflinks 0.229        
cufflinks 0.208        
cufflinks 0.193        
cufflinks 0.164        
cufflinks 0.225        
cufflinks 0.198        
cufflinks 0.075     Low Low
cufflinks 0.219        
cufflinks 0.224        
cufflinks 0.261        

0 Strain