Gene : Bradi3g30060 B. distachyon v3.1
Defline:  (1 of 2) PTHR13479:SF44 - F10K1.8 PROTEIN Genomic Order:  3625
Name:  ? Bradi3g30060 Secondary Identifier:  ? PAC:32818175
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g30060 0.5kb upstream 0.5kb upstream 4997 true Bd3: 31820385-31825381 Brachypodium distachyon
Bradi3g30060 0.5kb upstream 0.5kb upstream 500 false Bd3: 31820385-31820884 Brachypodium distachyon
Bradi3g30060 0.5kb downstream 0.5kb downstream 4997 true Bd3: 31820885-31825881 Brachypodium distachyon
Bradi3g30060 0.5kb downstream 0.5kb downstream 500 false Bd3: 31825382-31825881 Brachypodium distachyon
Bradi3g30060 1.0kb upstream 1.0kb upstream 5497 true Bd3: 31819885-31825381 Brachypodium distachyon
Bradi3g30060 1.0kb upstream 1.0kb upstream 1000 false Bd3: 31819885-31820884 Brachypodium distachyon
Bradi3g30060 1.0kb downstream 1.0kb downstream 5497 true Bd3: 31820885-31826381 Brachypodium distachyon
Bradi3g30060 1.0kb downstream 1.0kb downstream 1000 false Bd3: 31825382-31826381 Brachypodium distachyon
Bradi3g30060 2.0kb upstream 2.0kb upstream 6497 true Bd3: 31818885-31825381 Brachypodium distachyon
Bradi3g30060 2.0kb upstream 2.0kb upstream 2000 false Bd3: 31818885-31820884 Brachypodium distachyon
Bradi3g30060 2.0kb downstream 2.0kb downstream 6497 true Bd3: 31820885-31827381 Brachypodium distachyon
Bradi3g30060 2.0kb downstream 2.0kb downstream 2000 false Bd3: 31825382-31827381 Brachypodium distachyon
Bradi3g30060 5.0kb upstream 5.0kb upstream 9497 true Bd3: 31815885-31825381 Brachypodium distachyon
Bradi3g30060 5.0kb upstream 5.0kb upstream 5000 false Bd3: 31815885-31820884 Brachypodium distachyon
Bradi3g30060 5.0kb downstream 5.0kb downstream 9497 true Bd3: 31820885-31830381 Brachypodium distachyon
Bradi3g30060 5.0kb downstream 5.0kb downstream 5000 false Bd3: 31825382-31830381 Brachypodium distachyon
Bradi3g30060 10.0kb upstream 10.0kb upstream 14497 true Bd3: 31810885-31825381 Brachypodium distachyon
Bradi3g30060 10.0kb upstream 10.0kb upstream 10000 false Bd3: 31810885-31820884 Brachypodium distachyon
Bradi3g30060 10.0kb downstream 10.0kb downstream 14497 true Bd3: 31820885-31835381 Brachypodium distachyon
Bradi3g30060 10.0kb downstream 10.0kb downstream 10000 false Bd3: 31825382-31835381 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586692 5269 Grass View MSA
122043226 5273 Angiosperm View MSA
121343856 5274 Embryophyte View MSA
123427429 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.884        
cufflinks 2.388        
cufflinks 1.92        
cufflinks 2.45        
cufflinks 2.071        
cufflinks 2.238        
cufflinks 2.203        
cufflinks 2.449        
cufflinks 2.252        
cufflinks 1.717        
cufflinks 1.779        
cufflinks 2.445        
cufflinks 1.631       Low
cufflinks 1.555       Low
cufflinks 3.498       High
cufflinks 2.081        
cufflinks 2.703        
cufflinks 4.721       High
cufflinks 2.942        
cufflinks 1.058       Low
cufflinks 2.806        
cufflinks 1.879        
cufflinks 2.562        
cufflinks 2.437        
cufflinks 2.324        
cufflinks 1.658        
cufflinks 1.71        
cufflinks 1.766        
cufflinks 1.642        
cufflinks 3.0        

0 Strain