Gene : Bradi3g27306 B. distachyon v3.1
Defline:  (1 of 1) PF00411//PF01000//PF01193 - Ribosomal protein S11 (Ribosomal_S11) // RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) Genomic Order:  3230
Name:  ? Bradi3g27306 Secondary Identifier:  ? PAC:32821127
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g27306 0.5kb upstream 0.5kb upstream 1672 true Bd3: 28023452-28025123 Brachypodium distachyon
Bradi3g27306 0.5kb upstream 0.5kb upstream 500 false Bd3: 28023452-28023951 Brachypodium distachyon
Bradi3g27306 0.5kb downstream 0.5kb downstream 1672 true Bd3: 28023952-28025623 Brachypodium distachyon
Bradi3g27306 0.5kb downstream 0.5kb downstream 500 false Bd3: 28025124-28025623 Brachypodium distachyon
Bradi3g27306 1.0kb upstream 1.0kb upstream 2172 true Bd3: 28022952-28025123 Brachypodium distachyon
Bradi3g27306 1.0kb upstream 1.0kb upstream 1000 false Bd3: 28022952-28023951 Brachypodium distachyon
Bradi3g27306 1.0kb downstream 1.0kb downstream 2172 true Bd3: 28023952-28026123 Brachypodium distachyon
Bradi3g27306 1.0kb downstream 1.0kb downstream 1000 false Bd3: 28025124-28026123 Brachypodium distachyon
Bradi3g27306 2.0kb upstream 2.0kb upstream 3172 true Bd3: 28021952-28025123 Brachypodium distachyon
Bradi3g27306 2.0kb upstream 2.0kb upstream 2000 false Bd3: 28021952-28023951 Brachypodium distachyon
Bradi3g27306 2.0kb downstream 2.0kb downstream 3172 true Bd3: 28023952-28027123 Brachypodium distachyon
Bradi3g27306 2.0kb downstream 2.0kb downstream 2000 false Bd3: 28025124-28027123 Brachypodium distachyon
Bradi3g27306 5.0kb upstream 5.0kb upstream 6172 true Bd3: 28018952-28025123 Brachypodium distachyon
Bradi3g27306 5.0kb upstream 5.0kb upstream 5000 false Bd3: 28018952-28023951 Brachypodium distachyon
Bradi3g27306 5.0kb downstream 5.0kb downstream 6172 true Bd3: 28023952-28030123 Brachypodium distachyon
Bradi3g27306 5.0kb downstream 5.0kb downstream 5000 false Bd3: 28025124-28030123 Brachypodium distachyon
Bradi3g27306 10.0kb upstream 10.0kb upstream 11172 true Bd3: 28013952-28025123 Brachypodium distachyon
Bradi3g27306 10.0kb upstream 10.0kb upstream 10000 false Bd3: 28013952-28023951 Brachypodium distachyon
Bradi3g27306 10.0kb downstream 10.0kb downstream 11172 true Bd3: 28023952-28035123 Brachypodium distachyon
Bradi3g27306 10.0kb downstream 10.0kb downstream 10000 false Bd3: 28025124-28035123 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029214 5273 Angiosperm View MSA
124590808 5269 Grass View MSA
121350838 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain