Gene : Bradi3g28470 B. distachyon v3.1
Defline:  (1 of 1) 4.2.1.104 - Cyanase / Cyanate lyase Genomic Order:  3409
Name:  ? Bradi3g28470 Secondary Identifier:  ? PAC:32814788
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon CYANCAT-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g28470 0.5kb upstream 0.5kb upstream 3256 true Bd3: 29559526-29562781 Brachypodium distachyon
Bradi3g28470 0.5kb upstream 0.5kb upstream 500 false Bd3: 29559526-29560025 Brachypodium distachyon
Bradi3g28470 0.5kb downstream 0.5kb downstream 3256 true Bd3: 29560026-29563281 Brachypodium distachyon
Bradi3g28470 0.5kb downstream 0.5kb downstream 500 false Bd3: 29562782-29563281 Brachypodium distachyon
Bradi3g28470 1.0kb upstream 1.0kb upstream 3756 true Bd3: 29559026-29562781 Brachypodium distachyon
Bradi3g28470 1.0kb upstream 1.0kb upstream 1000 false Bd3: 29559026-29560025 Brachypodium distachyon
Bradi3g28470 1.0kb downstream 1.0kb downstream 3756 true Bd3: 29560026-29563781 Brachypodium distachyon
Bradi3g28470 1.0kb downstream 1.0kb downstream 1000 false Bd3: 29562782-29563781 Brachypodium distachyon
Bradi3g28470 2.0kb upstream 2.0kb upstream 4756 true Bd3: 29558026-29562781 Brachypodium distachyon
Bradi3g28470 2.0kb upstream 2.0kb upstream 2000 false Bd3: 29558026-29560025 Brachypodium distachyon
Bradi3g28470 2.0kb downstream 2.0kb downstream 4756 true Bd3: 29560026-29564781 Brachypodium distachyon
Bradi3g28470 2.0kb downstream 2.0kb downstream 2000 false Bd3: 29562782-29564781 Brachypodium distachyon
Bradi3g28470 5.0kb upstream 5.0kb upstream 7756 true Bd3: 29555026-29562781 Brachypodium distachyon
Bradi3g28470 5.0kb upstream 5.0kb upstream 5000 false Bd3: 29555026-29560025 Brachypodium distachyon
Bradi3g28470 5.0kb downstream 5.0kb downstream 7756 true Bd3: 29560026-29567781 Brachypodium distachyon
Bradi3g28470 5.0kb downstream 5.0kb downstream 5000 false Bd3: 29562782-29567781 Brachypodium distachyon
Bradi3g28470 10.0kb upstream 10.0kb upstream 12756 true Bd3: 29550026-29562781 Brachypodium distachyon
Bradi3g28470 10.0kb upstream 10.0kb upstream 10000 false Bd3: 29550026-29560025 Brachypodium distachyon
Bradi3g28470 10.0kb downstream 10.0kb downstream 12756 true Bd3: 29560026-29572781 Brachypodium distachyon
Bradi3g28470 10.0kb downstream 10.0kb downstream 10000 false Bd3: 29562782-29572781 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569626 5269 Grass View MSA
122044092 5273 Angiosperm View MSA
121346381 5274 Embryophyte View MSA
123424096 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.48     High  
cufflinks 5.136       Low
cufflinks 8.504        
cufflinks 8.131        
cufflinks 18.057     High  
cufflinks 4.402       Low
cufflinks 5.095       Low
cufflinks 9.296     High  
cufflinks 5.726        
cufflinks 26.355     High High
cufflinks 10.267     High  
cufflinks 3.66       Low
cufflinks 5.348       Low
cufflinks 8.334     High  
cufflinks 11.407     High  
cufflinks 4.06       Low
cufflinks 12.116     High  
cufflinks 7.759        
cufflinks 46.105     High High
cufflinks 73.6     High High
cufflinks 10.067        
cufflinks 10.465     High  
cufflinks 11.477     High  
cufflinks 6.293        
cufflinks 6.101        
cufflinks 16.997     High  
cufflinks 8.178        
cufflinks 21.156     High  
cufflinks 16.441     High  
cufflinks 4.984       Low

0 Strain