Gene : Bradi3g33716 B. distachyon v3.1
Defline:  (1 of 1) PTHR23084:SF156 - RADIAL SPOKE HEAD 10 HOMOLOG B2 Genomic Order:  4084
Name:  ? Bradi3g33716 Secondary Identifier:  ? PAC:32822797
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6351 Brachypodium distachyon pathologic  
Bdistachyon PWY-6352 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g33716 0.5kb upstream 0.5kb upstream 4687 true Bd3: 35816022-35820708 Brachypodium distachyon
Bradi3g33716 0.5kb upstream 0.5kb upstream 500 false Bd3: 35816022-35816521 Brachypodium distachyon
Bradi3g33716 0.5kb downstream 0.5kb downstream 4687 true Bd3: 35816522-35821208 Brachypodium distachyon
Bradi3g33716 0.5kb downstream 0.5kb downstream 500 false Bd3: 35820709-35821208 Brachypodium distachyon
Bradi3g33716 1.0kb upstream 1.0kb upstream 5187 true Bd3: 35815522-35820708 Brachypodium distachyon
Bradi3g33716 1.0kb upstream 1.0kb upstream 1000 false Bd3: 35815522-35816521 Brachypodium distachyon
Bradi3g33716 1.0kb downstream 1.0kb downstream 5187 true Bd3: 35816522-35821708 Brachypodium distachyon
Bradi3g33716 1.0kb downstream 1.0kb downstream 1000 false Bd3: 35820709-35821708 Brachypodium distachyon
Bradi3g33716 2.0kb upstream 2.0kb upstream 6187 true Bd3: 35814522-35820708 Brachypodium distachyon
Bradi3g33716 2.0kb upstream 2.0kb upstream 2000 false Bd3: 35814522-35816521 Brachypodium distachyon
Bradi3g33716 2.0kb downstream 2.0kb downstream 6187 true Bd3: 35816522-35822708 Brachypodium distachyon
Bradi3g33716 2.0kb downstream 2.0kb downstream 2000 false Bd3: 35820709-35822708 Brachypodium distachyon
Bradi3g33716 5.0kb upstream 5.0kb upstream 9187 true Bd3: 35811522-35820708 Brachypodium distachyon
Bradi3g33716 5.0kb upstream 5.0kb upstream 5000 false Bd3: 35811522-35816521 Brachypodium distachyon
Bradi3g33716 5.0kb downstream 5.0kb downstream 9187 true Bd3: 35816522-35825708 Brachypodium distachyon
Bradi3g33716 5.0kb downstream 5.0kb downstream 5000 false Bd3: 35820709-35825708 Brachypodium distachyon
Bradi3g33716 10.0kb upstream 10.0kb upstream 14187 true Bd3: 35806522-35820708 Brachypodium distachyon
Bradi3g33716 10.0kb upstream 10.0kb upstream 10000 false Bd3: 35806522-35816521 Brachypodium distachyon
Bradi3g33716 10.0kb downstream 10.0kb downstream 14187 true Bd3: 35816522-35830708 Brachypodium distachyon
Bradi3g33716 10.0kb downstream 10.0kb downstream 10000 false Bd3: 35820709-35830708 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574707 5269 Grass View MSA
122047970 5273 Angiosperm View MSA
121346800 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.415        
cufflinks 1.744        
cufflinks 4.138       High
cufflinks 1.287        
cufflinks 1.835        
cufflinks 0.998       Low
cufflinks 1.613        
cufflinks 1.27        
cufflinks 0.938       Low
cufflinks 5.519       High
cufflinks 2.557        
cufflinks 1.239        
cufflinks 1.37        
cufflinks 1.129        
cufflinks 1.2        
cufflinks 1.633        
cufflinks 1.235        
cufflinks 5.348       High
cufflinks 5.596       High
cufflinks 2.62        
cufflinks 1.792        
cufflinks 6.11       High
cufflinks 1.299        
cufflinks 0.897       Low
cufflinks 0.99       Low
cufflinks 4.532       High
cufflinks 1.404        
cufflinks 6.104       High
cufflinks 5.109       High
cufflinks 2.005        

0 Strain