Gene : Bradi3g33770 B. distachyon v3.1
Defline:  (1 of 1) PTHR10772//PTHR10772:SF13 - 10 KDA HEAT SHOCK PROTEIN // CHLOROPLAST CHAPERONIN 10 Genomic Order:  4096
Name:  ? Bradi3g33770 Secondary Identifier:  ? PAC:32820471
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g33770 0.5kb upstream 0.5kb upstream 3149 true Bd3: 35994663-35997811 Brachypodium distachyon
Bradi3g33770 0.5kb upstream 0.5kb upstream 500 false Bd3: 35994663-35995162 Brachypodium distachyon
Bradi3g33770 0.5kb downstream 0.5kb downstream 3149 true Bd3: 35995163-35998311 Brachypodium distachyon
Bradi3g33770 0.5kb downstream 0.5kb downstream 500 false Bd3: 35997812-35998311 Brachypodium distachyon
Bradi3g33770 1.0kb upstream 1.0kb upstream 3649 true Bd3: 35994163-35997811 Brachypodium distachyon
Bradi3g33770 1.0kb upstream 1.0kb upstream 1000 false Bd3: 35994163-35995162 Brachypodium distachyon
Bradi3g33770 1.0kb downstream 1.0kb downstream 3649 true Bd3: 35995163-35998811 Brachypodium distachyon
Bradi3g33770 1.0kb downstream 1.0kb downstream 1000 false Bd3: 35997812-35998811 Brachypodium distachyon
Bradi3g33770 2.0kb upstream 2.0kb upstream 4649 true Bd3: 35993163-35997811 Brachypodium distachyon
Bradi3g33770 2.0kb upstream 2.0kb upstream 2000 false Bd3: 35993163-35995162 Brachypodium distachyon
Bradi3g33770 2.0kb downstream 2.0kb downstream 4649 true Bd3: 35995163-35999811 Brachypodium distachyon
Bradi3g33770 2.0kb downstream 2.0kb downstream 2000 false Bd3: 35997812-35999811 Brachypodium distachyon
Bradi3g33770 5.0kb upstream 5.0kb upstream 7649 true Bd3: 35990163-35997811 Brachypodium distachyon
Bradi3g33770 5.0kb upstream 5.0kb upstream 5000 false Bd3: 35990163-35995162 Brachypodium distachyon
Bradi3g33770 5.0kb downstream 5.0kb downstream 7649 true Bd3: 35995163-36002811 Brachypodium distachyon
Bradi3g33770 5.0kb downstream 5.0kb downstream 5000 false Bd3: 35997812-36002811 Brachypodium distachyon
Bradi3g33770 10.0kb upstream 10.0kb upstream 12649 true Bd3: 35985163-35997811 Brachypodium distachyon
Bradi3g33770 10.0kb upstream 10.0kb upstream 10000 false Bd3: 35985163-35995162 Brachypodium distachyon
Bradi3g33770 10.0kb downstream 10.0kb downstream 12649 true Bd3: 35995163-36007811 Brachypodium distachyon
Bradi3g33770 10.0kb downstream 10.0kb downstream 10000 false Bd3: 35997812-36007811 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570892 5269 Grass View MSA
122042502 5273 Angiosperm View MSA
121347169 5274 Embryophyte View MSA
123426072 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 69.83     High High
cufflinks 45.871     High  
cufflinks 38.341     High  
cufflinks 51.626     High  
cufflinks 43.717     High  
cufflinks 34.53     High  
cufflinks 48.315     High  
cufflinks 39.314     High  
cufflinks 33.223     High  
cufflinks 71.709     High High
cufflinks 21.324     High  
cufflinks 22.739     High  
cufflinks 15.615     High Low
cufflinks 20.64     High  
cufflinks 22.876     High  
cufflinks 39.59     High  
cufflinks 93.037     High High
cufflinks 9.448       Low
cufflinks 119.189     High High
cufflinks 22.859     High  
cufflinks 35.719     High  
cufflinks 39.079     High  
cufflinks 37.411     High  
cufflinks 37.237     High  
cufflinks 47.525     High  
cufflinks 54.997     High  
cufflinks 12.008     High Low
cufflinks 57.518     High  
cufflinks 49.763     High  
cufflinks 33.208     High  

0 Strain