Gene : Bradi4g34440 B. distachyon v3.1
Defline:  (1 of 2) PTHR10026:SF7 - CYCLIN-C Genomic Order:  4425
Name:  ? Bradi4g34440 Secondary Identifier:  ? PAC:32786980
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g34440 0.5kb upstream 0.5kb upstream 5099 true Bd4: 39975462-39980560 Brachypodium distachyon
Bradi4g34440 0.5kb upstream 0.5kb upstream 500 false Bd4: 39975462-39975961 Brachypodium distachyon
Bradi4g34440 0.5kb downstream 0.5kb downstream 5099 true Bd4: 39975962-39981060 Brachypodium distachyon
Bradi4g34440 0.5kb downstream 0.5kb downstream 500 false Bd4: 39980561-39981060 Brachypodium distachyon
Bradi4g34440 1.0kb upstream 1.0kb upstream 5599 true Bd4: 39974962-39980560 Brachypodium distachyon
Bradi4g34440 1.0kb upstream 1.0kb upstream 1000 false Bd4: 39974962-39975961 Brachypodium distachyon
Bradi4g34440 1.0kb downstream 1.0kb downstream 5599 true Bd4: 39975962-39981560 Brachypodium distachyon
Bradi4g34440 1.0kb downstream 1.0kb downstream 1000 false Bd4: 39980561-39981560 Brachypodium distachyon
Bradi4g34440 2.0kb upstream 2.0kb upstream 6599 true Bd4: 39973962-39980560 Brachypodium distachyon
Bradi4g34440 2.0kb upstream 2.0kb upstream 2000 false Bd4: 39973962-39975961 Brachypodium distachyon
Bradi4g34440 2.0kb downstream 2.0kb downstream 6599 true Bd4: 39975962-39982560 Brachypodium distachyon
Bradi4g34440 2.0kb downstream 2.0kb downstream 2000 false Bd4: 39980561-39982560 Brachypodium distachyon
Bradi4g34440 5.0kb upstream 5.0kb upstream 9599 true Bd4: 39970962-39980560 Brachypodium distachyon
Bradi4g34440 5.0kb upstream 5.0kb upstream 5000 false Bd4: 39970962-39975961 Brachypodium distachyon
Bradi4g34440 5.0kb downstream 5.0kb downstream 9599 true Bd4: 39975962-39985560 Brachypodium distachyon
Bradi4g34440 5.0kb downstream 5.0kb downstream 5000 false Bd4: 39980561-39985560 Brachypodium distachyon
Bradi4g34440 10.0kb upstream 10.0kb upstream 14599 true Bd4: 39965962-39980560 Brachypodium distachyon
Bradi4g34440 10.0kb upstream 10.0kb upstream 10000 false Bd4: 39965962-39975961 Brachypodium distachyon
Bradi4g34440 10.0kb downstream 10.0kb downstream 14599 true Bd4: 39975962-39990560 Brachypodium distachyon
Bradi4g34440 10.0kb downstream 10.0kb downstream 10000 false Bd4: 39980561-39990560 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570436 5269 Grass View MSA
122042556 5273 Angiosperm View MSA
123429117 5275 Viridiplantae View MSA
121346319 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.337        
cufflinks 8.221       Low
cufflinks 10.564     High  
cufflinks 10.663     High  
cufflinks 11.301     High  
cufflinks 8.291       Low
cufflinks 8.15       Low
cufflinks 8.362       Low
cufflinks 8.817        
cufflinks 13.662     High High
cufflinks 10.064     High  
cufflinks 8.747       Low
cufflinks 9.995     High  
cufflinks 9.684     High  
cufflinks 11.068     High  
cufflinks 7.663       Low
cufflinks 13.351     High  
cufflinks 8.712       Low
cufflinks 13.136     High  
cufflinks 16.116     High High
cufflinks 14.847     High High
cufflinks 10.088     High  
cufflinks 8.889        
cufflinks 9.822     High  
cufflinks 10.208     High  
cufflinks 13.008     High  
cufflinks 11.936     High  
cufflinks 13.65     High High
cufflinks 11.748     High  
cufflinks 12.766     High  

0 Strain