Gene : Bradi3g32780 B. distachyon v3.1
Defline:  (1 of 1) K12600 - superkiller protein 3 (SKI3, TTC37) Genomic Order:  3965
Name:  ? Bradi3g32780 Secondary Identifier:  ? PAC:32821540
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g32780 0.5kb upstream 0.5kb upstream 9412 true Bd3: 34927733-34937144 Brachypodium distachyon
Bradi3g32780 0.5kb upstream 0.5kb upstream 500 false Bd3: 34936645-34937144 Brachypodium distachyon
Bradi3g32780 0.5kb downstream 0.5kb downstream 9412 true Bd3: 34927233-34936644 Brachypodium distachyon
Bradi3g32780 0.5kb downstream 0.5kb downstream 500 false Bd3: 34927233-34927732 Brachypodium distachyon
Bradi3g32780 1.0kb upstream 1.0kb upstream 9912 true Bd3: 34927733-34937644 Brachypodium distachyon
Bradi3g32780 1.0kb upstream 1.0kb upstream 1000 false Bd3: 34936645-34937644 Brachypodium distachyon
Bradi3g32780 1.0kb downstream 1.0kb downstream 9912 true Bd3: 34926733-34936644 Brachypodium distachyon
Bradi3g32780 1.0kb downstream 1.0kb downstream 1000 false Bd3: 34926733-34927732 Brachypodium distachyon
Bradi3g32780 2.0kb upstream 2.0kb upstream 10912 true Bd3: 34927733-34938644 Brachypodium distachyon
Bradi3g32780 2.0kb upstream 2.0kb upstream 2000 false Bd3: 34936645-34938644 Brachypodium distachyon
Bradi3g32780 2.0kb downstream 2.0kb downstream 10912 true Bd3: 34925733-34936644 Brachypodium distachyon
Bradi3g32780 2.0kb downstream 2.0kb downstream 2000 false Bd3: 34925733-34927732 Brachypodium distachyon
Bradi3g32780 5.0kb upstream 5.0kb upstream 13912 true Bd3: 34927733-34941644 Brachypodium distachyon
Bradi3g32780 5.0kb upstream 5.0kb upstream 5000 false Bd3: 34936645-34941644 Brachypodium distachyon
Bradi3g32780 5.0kb downstream 5.0kb downstream 13912 true Bd3: 34922733-34936644 Brachypodium distachyon
Bradi3g32780 5.0kb downstream 5.0kb downstream 5000 false Bd3: 34922733-34927732 Brachypodium distachyon
Bradi3g32780 10.0kb upstream 10.0kb upstream 18912 true Bd3: 34927733-34946644 Brachypodium distachyon
Bradi3g32780 10.0kb upstream 10.0kb upstream 10000 false Bd3: 34936645-34946644 Brachypodium distachyon
Bradi3g32780 10.0kb downstream 10.0kb downstream 18912 true Bd3: 34917733-34936644 Brachypodium distachyon
Bradi3g32780 10.0kb downstream 10.0kb downstream 10000 false Bd3: 34917733-34927732 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582618 5269 Grass View MSA
122046967 5273 Angiosperm View MSA
121344761 5274 Embryophyte View MSA
123425993 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.21        
cufflinks 1.704        
cufflinks 1.878       High
cufflinks 1.365        
cufflinks 0.527       Low
cufflinks 1.565        
cufflinks 1.481        
cufflinks 1.455        
cufflinks 1.686        
cufflinks 1.032        
cufflinks 1.711        
cufflinks 1.497        
cufflinks 1.29        
cufflinks 1.276        
cufflinks 0.857        
cufflinks 1.651        
cufflinks 0.795        
cufflinks 1.82        
cufflinks 0.992        
cufflinks 0.381       Low
cufflinks 0.944        
cufflinks 1.872       High
cufflinks 1.376        
cufflinks 1.181        
cufflinks 1.136        
cufflinks 1.575        
cufflinks 1.63        
cufflinks 1.656        
cufflinks 1.685        
cufflinks 1.312        

0 Strain