Gene : Bradi3g37880 B. distachyon v3.1
Defline:  (1 of 1) PTHR12225 - ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN Genomic Order:  4657
Name:  ? Bradi3g37880 Secondary Identifier:  ? PAC:32818258
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g37880 0.5kb upstream 0.5kb upstream 5985 true Bd3: 40156201-40162185 Brachypodium distachyon
Bradi3g37880 0.5kb upstream 0.5kb upstream 500 false Bd3: 40156201-40156700 Brachypodium distachyon
Bradi3g37880 0.5kb downstream 0.5kb downstream 5985 true Bd3: 40156701-40162685 Brachypodium distachyon
Bradi3g37880 0.5kb downstream 0.5kb downstream 500 false Bd3: 40162186-40162685 Brachypodium distachyon
Bradi3g37880 1.0kb upstream 1.0kb upstream 6485 true Bd3: 40155701-40162185 Brachypodium distachyon
Bradi3g37880 1.0kb upstream 1.0kb upstream 1000 false Bd3: 40155701-40156700 Brachypodium distachyon
Bradi3g37880 1.0kb downstream 1.0kb downstream 6485 true Bd3: 40156701-40163185 Brachypodium distachyon
Bradi3g37880 1.0kb downstream 1.0kb downstream 1000 false Bd3: 40162186-40163185 Brachypodium distachyon
Bradi3g37880 2.0kb upstream 2.0kb upstream 7485 true Bd3: 40154701-40162185 Brachypodium distachyon
Bradi3g37880 2.0kb upstream 2.0kb upstream 2000 false Bd3: 40154701-40156700 Brachypodium distachyon
Bradi3g37880 2.0kb downstream 2.0kb downstream 7485 true Bd3: 40156701-40164185 Brachypodium distachyon
Bradi3g37880 2.0kb downstream 2.0kb downstream 2000 false Bd3: 40162186-40164185 Brachypodium distachyon
Bradi3g37880 5.0kb upstream 5.0kb upstream 10485 true Bd3: 40151701-40162185 Brachypodium distachyon
Bradi3g37880 5.0kb upstream 5.0kb upstream 5000 false Bd3: 40151701-40156700 Brachypodium distachyon
Bradi3g37880 5.0kb downstream 5.0kb downstream 10485 true Bd3: 40156701-40167185 Brachypodium distachyon
Bradi3g37880 5.0kb downstream 5.0kb downstream 5000 false Bd3: 40162186-40167185 Brachypodium distachyon
Bradi3g37880 10.0kb upstream 10.0kb upstream 15485 true Bd3: 40146701-40162185 Brachypodium distachyon
Bradi3g37880 10.0kb upstream 10.0kb upstream 10000 false Bd3: 40146701-40156700 Brachypodium distachyon
Bradi3g37880 10.0kb downstream 10.0kb downstream 15485 true Bd3: 40156701-40172185 Brachypodium distachyon
Bradi3g37880 10.0kb downstream 10.0kb downstream 10000 false Bd3: 40162186-40172185 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041235 5273 Angiosperm View MSA
124580756 5269 Grass View MSA
121344087 5274 Embryophyte View MSA
123425149 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.113        
cufflinks 9.338        
cufflinks 8.216        
cufflinks 7.62        
cufflinks 6.242        
cufflinks 9.045        
cufflinks 8.637        
cufflinks 7.261        
cufflinks 8.421        
cufflinks 6.904        
cufflinks 6.623        
cufflinks 7.307        
cufflinks 5.977        
cufflinks 5.478       Low
cufflinks 5.907        
cufflinks 9.14        
cufflinks 9.754        
cufflinks 11.771     High High
cufflinks 10.739       High
cufflinks 3.358       Low
cufflinks 9.175        
cufflinks 9.121        
cufflinks 7.302        
cufflinks 8.01        
cufflinks 8.654        
cufflinks 8.15        
cufflinks 6.686        
cufflinks 7.857        
cufflinks 7.32        
cufflinks 9.038        

0 Strain