Gene : Bradi4g33660 B. distachyon v3.1
Defline:  (1 of 1) 3.2.1.82 - Exo-poly-alpha-galacturonosidase / Exopolygalacturanosidase Genomic Order:  4324
Name:  ? Bradi4g33660 Secondary Identifier:  ? PAC:32785991
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g33660 0.5kb upstream 0.5kb upstream 3367 true Bd4: 39265378-39268744 Brachypodium distachyon
Bradi4g33660 0.5kb upstream 0.5kb upstream 500 false Bd4: 39268245-39268744 Brachypodium distachyon
Bradi4g33660 0.5kb downstream 0.5kb downstream 3367 true Bd4: 39264878-39268244 Brachypodium distachyon
Bradi4g33660 0.5kb downstream 0.5kb downstream 500 false Bd4: 39264878-39265377 Brachypodium distachyon
Bradi4g33660 1.0kb upstream 1.0kb upstream 3867 true Bd4: 39265378-39269244 Brachypodium distachyon
Bradi4g33660 1.0kb upstream 1.0kb upstream 1000 false Bd4: 39268245-39269244 Brachypodium distachyon
Bradi4g33660 1.0kb downstream 1.0kb downstream 3867 true Bd4: 39264378-39268244 Brachypodium distachyon
Bradi4g33660 1.0kb downstream 1.0kb downstream 1000 false Bd4: 39264378-39265377 Brachypodium distachyon
Bradi4g33660 2.0kb upstream 2.0kb upstream 4867 true Bd4: 39265378-39270244 Brachypodium distachyon
Bradi4g33660 2.0kb upstream 2.0kb upstream 2000 false Bd4: 39268245-39270244 Brachypodium distachyon
Bradi4g33660 2.0kb downstream 2.0kb downstream 4867 true Bd4: 39263378-39268244 Brachypodium distachyon
Bradi4g33660 2.0kb downstream 2.0kb downstream 2000 false Bd4: 39263378-39265377 Brachypodium distachyon
Bradi4g33660 5.0kb upstream 5.0kb upstream 7867 true Bd4: 39265378-39273244 Brachypodium distachyon
Bradi4g33660 5.0kb upstream 5.0kb upstream 5000 false Bd4: 39268245-39273244 Brachypodium distachyon
Bradi4g33660 5.0kb downstream 5.0kb downstream 7867 true Bd4: 39260378-39268244 Brachypodium distachyon
Bradi4g33660 5.0kb downstream 5.0kb downstream 5000 false Bd4: 39260378-39265377 Brachypodium distachyon
Bradi4g33660 10.0kb upstream 10.0kb upstream 12867 true Bd4: 39265378-39278244 Brachypodium distachyon
Bradi4g33660 10.0kb upstream 10.0kb upstream 10000 false Bd4: 39268245-39278244 Brachypodium distachyon
Bradi4g33660 10.0kb downstream 10.0kb downstream 12867 true Bd4: 39255378-39268244 Brachypodium distachyon
Bradi4g33660 10.0kb downstream 10.0kb downstream 10000 false Bd4: 39255378-39265377 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575832 5269 Grass View MSA
122041553 5273 Angiosperm View MSA
121343864 5274 Embryophyte View MSA
123425677 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.62       Low
cufflinks 4.687        
cufflinks 6.313        
cufflinks 4.581        
cufflinks 4.121        
cufflinks 3.461        
cufflinks 4.11        
cufflinks 2.507       Low
cufflinks 2.555       Low
cufflinks 7.82        
cufflinks 2.985        
cufflinks 3.455        
cufflinks 2.686       Low
cufflinks 2.365       Low
cufflinks 2.634       Low
cufflinks 3.107        
cufflinks 3.298        
cufflinks 8.574       High
cufflinks 7.937       High
cufflinks 12.238     High High
cufflinks 6.09        
cufflinks 5.996        
cufflinks 2.44       Low
cufflinks 2.28       Low
cufflinks 3.269        
cufflinks 8.392       High
cufflinks 4.19        
cufflinks 9.027       High
cufflinks 7.612        
cufflinks 6.169        

0 Strain