Gene : Bradi3g39510 B. distachyon v3.1
Defline:  (1 of 1) K13342 - peroxin-5 (PEX5, PXR1) Genomic Order:  4859
Name:  ? Bradi3g39510 Secondary Identifier:  ? PAC:32820133
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g39510 0.5kb upstream 0.5kb upstream 10399 true Bd3: 41519725-41530123 Brachypodium distachyon
Bradi3g39510 0.5kb upstream 0.5kb upstream 500 false Bd3: 41519725-41520224 Brachypodium distachyon
Bradi3g39510 0.5kb downstream 0.5kb downstream 10399 true Bd3: 41520225-41530623 Brachypodium distachyon
Bradi3g39510 0.5kb downstream 0.5kb downstream 500 false Bd3: 41530124-41530623 Brachypodium distachyon
Bradi3g39510 1.0kb upstream 1.0kb upstream 10899 true Bd3: 41519225-41530123 Brachypodium distachyon
Bradi3g39510 1.0kb upstream 1.0kb upstream 1000 false Bd3: 41519225-41520224 Brachypodium distachyon
Bradi3g39510 1.0kb downstream 1.0kb downstream 10899 true Bd3: 41520225-41531123 Brachypodium distachyon
Bradi3g39510 1.0kb downstream 1.0kb downstream 1000 false Bd3: 41530124-41531123 Brachypodium distachyon
Bradi3g39510 2.0kb upstream 2.0kb upstream 11899 true Bd3: 41518225-41530123 Brachypodium distachyon
Bradi3g39510 2.0kb upstream 2.0kb upstream 2000 false Bd3: 41518225-41520224 Brachypodium distachyon
Bradi3g39510 2.0kb downstream 2.0kb downstream 11899 true Bd3: 41520225-41532123 Brachypodium distachyon
Bradi3g39510 2.0kb downstream 2.0kb downstream 2000 false Bd3: 41530124-41532123 Brachypodium distachyon
Bradi3g39510 5.0kb upstream 5.0kb upstream 14899 true Bd3: 41515225-41530123 Brachypodium distachyon
Bradi3g39510 5.0kb upstream 5.0kb upstream 5000 false Bd3: 41515225-41520224 Brachypodium distachyon
Bradi3g39510 5.0kb downstream 5.0kb downstream 14899 true Bd3: 41520225-41535123 Brachypodium distachyon
Bradi3g39510 5.0kb downstream 5.0kb downstream 5000 false Bd3: 41530124-41535123 Brachypodium distachyon
Bradi3g39510 10.0kb upstream 10.0kb upstream 19899 true Bd3: 41510225-41530123 Brachypodium distachyon
Bradi3g39510 10.0kb upstream 10.0kb upstream 10000 false Bd3: 41510225-41520224 Brachypodium distachyon
Bradi3g39510 10.0kb downstream 10.0kb downstream 19899 true Bd3: 41520225-41540123 Brachypodium distachyon
Bradi3g39510 10.0kb downstream 10.0kb downstream 10000 false Bd3: 41530124-41540123 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043170 5273 Angiosperm View MSA
124576148 5269 Grass View MSA
121345209 5274 Embryophyte View MSA
123423857 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.929        
cufflinks 4.465        
cufflinks 3.116        
cufflinks 2.974        
cufflinks 1.999       Low
cufflinks 5.233       High
cufflinks 4.68        
cufflinks 2.989        
cufflinks 4.89        
cufflinks 2.017       Low
cufflinks 6.4       High
cufflinks 4.628        
cufflinks 5.638       High
cufflinks 5.024       High
cufflinks 2.36        
cufflinks 5.142       High
cufflinks 2.594        
cufflinks 3.107        
cufflinks 4.229        
cufflinks 3.985        
cufflinks 2.697        
cufflinks 3.057        
cufflinks 2.919        
cufflinks 4.64        
cufflinks 4.516        
cufflinks 2.786        
cufflinks 6.204       High
cufflinks 2.838        
cufflinks 2.699        
cufflinks 2.888        

0 Strain