Gene : Bradi3g40230 B. distachyon v3.1
Defline:  (1 of 1) PTHR11668//PTHR11668:SF241 - SERINE/THREONINE PROTEIN PHOSPHATASE // SERINE/THREONINE-PROTEIN PHOSPHATASE 7 INACTIVE HOMOLOG-RELATED Genomic Order:  4949
Name:  ? Bradi3g40230 Secondary Identifier:  ? PAC:32813643
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g40230 0.5kb upstream 0.5kb upstream 4737 true Bd3: 42163589-42168325 Brachypodium distachyon
Bradi3g40230 0.5kb upstream 0.5kb upstream 500 false Bd3: 42163589-42164088 Brachypodium distachyon
Bradi3g40230 0.5kb downstream 0.5kb downstream 4737 true Bd3: 42164089-42168825 Brachypodium distachyon
Bradi3g40230 0.5kb downstream 0.5kb downstream 500 false Bd3: 42168326-42168825 Brachypodium distachyon
Bradi3g40230 1.0kb upstream 1.0kb upstream 5237 true Bd3: 42163089-42168325 Brachypodium distachyon
Bradi3g40230 1.0kb upstream 1.0kb upstream 1000 false Bd3: 42163089-42164088 Brachypodium distachyon
Bradi3g40230 1.0kb downstream 1.0kb downstream 5237 true Bd3: 42164089-42169325 Brachypodium distachyon
Bradi3g40230 1.0kb downstream 1.0kb downstream 1000 false Bd3: 42168326-42169325 Brachypodium distachyon
Bradi3g40230 2.0kb upstream 2.0kb upstream 6237 true Bd3: 42162089-42168325 Brachypodium distachyon
Bradi3g40230 2.0kb upstream 2.0kb upstream 2000 false Bd3: 42162089-42164088 Brachypodium distachyon
Bradi3g40230 2.0kb downstream 2.0kb downstream 6237 true Bd3: 42164089-42170325 Brachypodium distachyon
Bradi3g40230 2.0kb downstream 2.0kb downstream 2000 false Bd3: 42168326-42170325 Brachypodium distachyon
Bradi3g40230 5.0kb upstream 5.0kb upstream 9237 true Bd3: 42159089-42168325 Brachypodium distachyon
Bradi3g40230 5.0kb upstream 5.0kb upstream 5000 false Bd3: 42159089-42164088 Brachypodium distachyon
Bradi3g40230 5.0kb downstream 5.0kb downstream 9237 true Bd3: 42164089-42173325 Brachypodium distachyon
Bradi3g40230 5.0kb downstream 5.0kb downstream 5000 false Bd3: 42168326-42173325 Brachypodium distachyon
Bradi3g40230 10.0kb upstream 10.0kb upstream 14237 true Bd3: 42154089-42168325 Brachypodium distachyon
Bradi3g40230 10.0kb upstream 10.0kb upstream 10000 false Bd3: 42154089-42164088 Brachypodium distachyon
Bradi3g40230 10.0kb downstream 10.0kb downstream 14237 true Bd3: 42164089-42178325 Brachypodium distachyon
Bradi3g40230 10.0kb downstream 10.0kb downstream 10000 false Bd3: 42168326-42178325 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576153 5269 Grass View MSA
122047426 5273 Angiosperm View MSA
123429115 5275 Viridiplantae View MSA
121344801 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.423        
cufflinks 3.593        
cufflinks 3.556        
cufflinks 3.397        
cufflinks 2.841        
cufflinks 3.088        
cufflinks 3.287        
cufflinks 3.34        
cufflinks 2.892        
cufflinks 3.55        
cufflinks 2.682        
cufflinks 2.825        
cufflinks 2.374       Low
cufflinks 2.328       Low
cufflinks 2.553       Low
cufflinks 3.152        
cufflinks 3.955        
cufflinks 5.708       High
cufflinks 4.435       High
cufflinks 2.549       Low
cufflinks 4.129        
cufflinks 4.078        
cufflinks 3.322        
cufflinks 3.12        
cufflinks 3.281        
cufflinks 3.701        
cufflinks 3.513        
cufflinks 3.473        
cufflinks 3.646        
cufflinks 4.074        

0 Strain