Gene : Bradi3g43920 B. distachyon v3.1
Defline:  (1 of 1) PTHR31155//PTHR31155:SF8 - ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  5427
Name:  ? Bradi3g43920 Secondary Identifier:  ? PAC:32819252
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5147 Brachypodium distachyon pathologic  
Bdistachyon PWY-5156 Brachypodium distachyon pathologic  
Bdistachyon PWY-5366 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g43920 0.5kb upstream 0.5kb upstream 4507 true Bd3: 45354614-45359120 Brachypodium distachyon
Bradi3g43920 0.5kb upstream 0.5kb upstream 500 false Bd3: 45358621-45359120 Brachypodium distachyon
Bradi3g43920 0.5kb downstream 0.5kb downstream 4507 true Bd3: 45354114-45358620 Brachypodium distachyon
Bradi3g43920 0.5kb downstream 0.5kb downstream 500 false Bd3: 45354114-45354613 Brachypodium distachyon
Bradi3g43920 1.0kb upstream 1.0kb upstream 5007 true Bd3: 45354614-45359620 Brachypodium distachyon
Bradi3g43920 1.0kb upstream 1.0kb upstream 1000 false Bd3: 45358621-45359620 Brachypodium distachyon
Bradi3g43920 1.0kb downstream 1.0kb downstream 5007 true Bd3: 45353614-45358620 Brachypodium distachyon
Bradi3g43920 1.0kb downstream 1.0kb downstream 1000 false Bd3: 45353614-45354613 Brachypodium distachyon
Bradi3g43920 2.0kb upstream 2.0kb upstream 6007 true Bd3: 45354614-45360620 Brachypodium distachyon
Bradi3g43920 2.0kb upstream 2.0kb upstream 2000 false Bd3: 45358621-45360620 Brachypodium distachyon
Bradi3g43920 2.0kb downstream 2.0kb downstream 6007 true Bd3: 45352614-45358620 Brachypodium distachyon
Bradi3g43920 2.0kb downstream 2.0kb downstream 2000 false Bd3: 45352614-45354613 Brachypodium distachyon
Bradi3g43920 5.0kb upstream 5.0kb upstream 9007 true Bd3: 45354614-45363620 Brachypodium distachyon
Bradi3g43920 5.0kb upstream 5.0kb upstream 5000 false Bd3: 45358621-45363620 Brachypodium distachyon
Bradi3g43920 5.0kb downstream 5.0kb downstream 9007 true Bd3: 45349614-45358620 Brachypodium distachyon
Bradi3g43920 5.0kb downstream 5.0kb downstream 5000 false Bd3: 45349614-45354613 Brachypodium distachyon
Bradi3g43920 10.0kb upstream 10.0kb upstream 14007 true Bd3: 45354614-45368620 Brachypodium distachyon
Bradi3g43920 10.0kb upstream 10.0kb upstream 10000 false Bd3: 45358621-45368620 Brachypodium distachyon
Bradi3g43920 10.0kb downstream 10.0kb downstream 14007 true Bd3: 45344614-45358620 Brachypodium distachyon
Bradi3g43920 10.0kb downstream 10.0kb downstream 10000 false Bd3: 45344614-45354613 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124545501 5269 Grass View MSA
122047247 5273 Angiosperm View MSA
121347152 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.363       High
cufflinks 0.069     Low  
cufflinks 0.044     Low  
cufflinks 0.086     Low  
cufflinks 0.259       High
cufflinks 0.093        
cufflinks 0.058     Low  
cufflinks 0.103        
cufflinks 0.076     Low  
cufflinks 0.164        
cufflinks 0.559       High
cufflinks 0.114        
cufflinks 0.042     Low  
cufflinks 0.245        
cufflinks 0.225        
cufflinks 0.179        
cufflinks 0.113     Low  
cufflinks 0.055     Low  
cufflinks 0.083     Low  
cufflinks 0.071     Low  
cufflinks 0.298       High
cufflinks 0.109     Low  
cufflinks 0.098        
cufflinks 0.068     Low  
cufflinks 0.099     Low  
cufflinks 0.099     Low  
cufflinks 0.012     Low Low
cufflinks 0.061     Low  
cufflinks 0.086     Low  
cufflinks 0.044     Low  

0 Strain