Gene : Bradi3g44197 B. distachyon v3.1
Defline:  (1 of 1) PTHR10670 - DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A Genomic Order:  5461
Name:  ? Bradi3g44197 Secondary Identifier:  ? PAC:32812913
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g44197 0.5kb upstream 0.5kb upstream 21039 true Bd3: 45643224-45664262 Brachypodium distachyon
Bradi3g44197 0.5kb upstream 0.5kb upstream 500 false Bd3: 45643224-45643723 Brachypodium distachyon
Bradi3g44197 0.5kb downstream 0.5kb downstream 21039 true Bd3: 45643724-45664762 Brachypodium distachyon
Bradi3g44197 0.5kb downstream 0.5kb downstream 500 false Bd3: 45664263-45664762 Brachypodium distachyon
Bradi3g44197 1.0kb upstream 1.0kb upstream 21539 true Bd3: 45642724-45664262 Brachypodium distachyon
Bradi3g44197 1.0kb upstream 1.0kb upstream 1000 false Bd3: 45642724-45643723 Brachypodium distachyon
Bradi3g44197 1.0kb downstream 1.0kb downstream 21539 true Bd3: 45643724-45665262 Brachypodium distachyon
Bradi3g44197 1.0kb downstream 1.0kb downstream 1000 false Bd3: 45664263-45665262 Brachypodium distachyon
Bradi3g44197 2.0kb upstream 2.0kb upstream 22539 true Bd3: 45641724-45664262 Brachypodium distachyon
Bradi3g44197 2.0kb upstream 2.0kb upstream 2000 false Bd3: 45641724-45643723 Brachypodium distachyon
Bradi3g44197 2.0kb downstream 2.0kb downstream 22539 true Bd3: 45643724-45666262 Brachypodium distachyon
Bradi3g44197 2.0kb downstream 2.0kb downstream 2000 false Bd3: 45664263-45666262 Brachypodium distachyon
Bradi3g44197 5.0kb upstream 5.0kb upstream 25539 true Bd3: 45638724-45664262 Brachypodium distachyon
Bradi3g44197 5.0kb upstream 5.0kb upstream 5000 false Bd3: 45638724-45643723 Brachypodium distachyon
Bradi3g44197 5.0kb downstream 5.0kb downstream 25539 true Bd3: 45643724-45669262 Brachypodium distachyon
Bradi3g44197 5.0kb downstream 5.0kb downstream 5000 false Bd3: 45664263-45669262 Brachypodium distachyon
Bradi3g44197 10.0kb upstream 10.0kb upstream 30539 true Bd3: 45633724-45664262 Brachypodium distachyon
Bradi3g44197 10.0kb upstream 10.0kb upstream 10000 false Bd3: 45633724-45643723 Brachypodium distachyon
Bradi3g44197 10.0kb downstream 10.0kb downstream 30539 true Bd3: 45643724-45674262 Brachypodium distachyon
Bradi3g44197 10.0kb downstream 10.0kb downstream 10000 false Bd3: 45664263-45674262 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573288 5269 Grass View MSA
122046610 5273 Angiosperm View MSA
121345888 5274 Embryophyte View MSA
123425547 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.584        
cufflinks 2.414       High
cufflinks 2.17        
cufflinks 1.426        
cufflinks 0.179        
cufflinks 2.148        
cufflinks 1.697        
cufflinks 1.458        
cufflinks 2.096        
cufflinks 0.737        
cufflinks 0.198        
cufflinks 1.792        
cufflinks 0.089       Low
cufflinks 0.105       Low
cufflinks 0.178        
cufflinks 2.056        
cufflinks 0.514        
cufflinks 3.224       High
cufflinks 0.509        
cufflinks 0.03     Low Low
cufflinks 0.536        
cufflinks 2.374       High
cufflinks 1.296        
cufflinks 1.167        
cufflinks 1.435        
cufflinks 1.573        
cufflinks 0.138       Low
cufflinks 1.394        
cufflinks 1.634        
cufflinks 1.863        

0 Strain