Gene : Bradi3g44335 B. distachyon v3.1
Defline:  (1 of 3) PTHR11638//PTHR11638:SF96 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  5484
Name:  ? Bradi3g44335 Secondary Identifier:  ? PAC:32823463
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g44335 0.5kb upstream 0.5kb upstream 8690 true Bd3: 45897476-45906165 Brachypodium distachyon
Bradi3g44335 0.5kb upstream 0.5kb upstream 500 false Bd3: 45905666-45906165 Brachypodium distachyon
Bradi3g44335 0.5kb downstream 0.5kb downstream 8690 true Bd3: 45896976-45905665 Brachypodium distachyon
Bradi3g44335 0.5kb downstream 0.5kb downstream 500 false Bd3: 45896976-45897475 Brachypodium distachyon
Bradi3g44335 1.0kb upstream 1.0kb upstream 9190 true Bd3: 45897476-45906665 Brachypodium distachyon
Bradi3g44335 1.0kb upstream 1.0kb upstream 1000 false Bd3: 45905666-45906665 Brachypodium distachyon
Bradi3g44335 1.0kb downstream 1.0kb downstream 9190 true Bd3: 45896476-45905665 Brachypodium distachyon
Bradi3g44335 1.0kb downstream 1.0kb downstream 1000 false Bd3: 45896476-45897475 Brachypodium distachyon
Bradi3g44335 2.0kb upstream 2.0kb upstream 10190 true Bd3: 45897476-45907665 Brachypodium distachyon
Bradi3g44335 2.0kb upstream 2.0kb upstream 2000 false Bd3: 45905666-45907665 Brachypodium distachyon
Bradi3g44335 2.0kb downstream 2.0kb downstream 10190 true Bd3: 45895476-45905665 Brachypodium distachyon
Bradi3g44335 2.0kb downstream 2.0kb downstream 2000 false Bd3: 45895476-45897475 Brachypodium distachyon
Bradi3g44335 5.0kb upstream 5.0kb upstream 13190 true Bd3: 45897476-45910665 Brachypodium distachyon
Bradi3g44335 5.0kb upstream 5.0kb upstream 5000 false Bd3: 45905666-45910665 Brachypodium distachyon
Bradi3g44335 5.0kb downstream 5.0kb downstream 13190 true Bd3: 45892476-45905665 Brachypodium distachyon
Bradi3g44335 5.0kb downstream 5.0kb downstream 5000 false Bd3: 45892476-45897475 Brachypodium distachyon
Bradi3g44335 10.0kb upstream 10.0kb upstream 18190 true Bd3: 45897476-45915665 Brachypodium distachyon
Bradi3g44335 10.0kb upstream 10.0kb upstream 10000 false Bd3: 45905666-45915665 Brachypodium distachyon
Bradi3g44335 10.0kb downstream 10.0kb downstream 18190 true Bd3: 45887476-45905665 Brachypodium distachyon
Bradi3g44335 10.0kb downstream 10.0kb downstream 10000 false Bd3: 45887476-45897475 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581910 5269 Grass View MSA
122047694 5273 Angiosperm View MSA
121345923 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.306     High  
cufflinks 73.926     High High
cufflinks 67.71     High High
cufflinks 63.467     High  
cufflinks 23.592     High Low
cufflinks 65.849     High High
cufflinks 60.392     High  
cufflinks 46.518     High  
cufflinks 54.346     High  
cufflinks 36.019     High  
cufflinks 44.939     High  
cufflinks 67.679     High High
cufflinks 41.017     High  
cufflinks 37.585     High  
cufflinks 37.175     High  
cufflinks 68.635     High High
cufflinks 28.487     High  
cufflinks 28.854     High  
cufflinks 26.373     High Low
cufflinks 32.223     High  
cufflinks 30.415     High  
cufflinks 62.458     High  
cufflinks 44.212     High  
cufflinks 49.932     High  
cufflinks 52.564     High  
cufflinks 57.304     High  
cufflinks 34.061     High  
cufflinks 50.599     High  
cufflinks 54.234     High  
cufflinks 65.547     High High

0 Strain