Gene : Bradi3g44341 B. distachyon v3.1
Defline:  (1 of 3) PTHR11638//PTHR11638:SF96 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  5485
Name:  ? Bradi3g44341 Secondary Identifier:  ? PAC:32813179
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g44341 0.5kb upstream 0.5kb upstream 7187 true Bd3: 45909946-45917132 Brachypodium distachyon
Bradi3g44341 0.5kb upstream 0.5kb upstream 500 false Bd3: 45916633-45917132 Brachypodium distachyon
Bradi3g44341 0.5kb downstream 0.5kb downstream 7187 true Bd3: 45909446-45916632 Brachypodium distachyon
Bradi3g44341 0.5kb downstream 0.5kb downstream 500 false Bd3: 45909446-45909945 Brachypodium distachyon
Bradi3g44341 1.0kb upstream 1.0kb upstream 7687 true Bd3: 45909946-45917632 Brachypodium distachyon
Bradi3g44341 1.0kb upstream 1.0kb upstream 1000 false Bd3: 45916633-45917632 Brachypodium distachyon
Bradi3g44341 1.0kb downstream 1.0kb downstream 7687 true Bd3: 45908946-45916632 Brachypodium distachyon
Bradi3g44341 1.0kb downstream 1.0kb downstream 1000 false Bd3: 45908946-45909945 Brachypodium distachyon
Bradi3g44341 2.0kb upstream 2.0kb upstream 8687 true Bd3: 45909946-45918632 Brachypodium distachyon
Bradi3g44341 2.0kb upstream 2.0kb upstream 2000 false Bd3: 45916633-45918632 Brachypodium distachyon
Bradi3g44341 2.0kb downstream 2.0kb downstream 8687 true Bd3: 45907946-45916632 Brachypodium distachyon
Bradi3g44341 2.0kb downstream 2.0kb downstream 2000 false Bd3: 45907946-45909945 Brachypodium distachyon
Bradi3g44341 5.0kb upstream 5.0kb upstream 11687 true Bd3: 45909946-45921632 Brachypodium distachyon
Bradi3g44341 5.0kb upstream 5.0kb upstream 5000 false Bd3: 45916633-45921632 Brachypodium distachyon
Bradi3g44341 5.0kb downstream 5.0kb downstream 11687 true Bd3: 45904946-45916632 Brachypodium distachyon
Bradi3g44341 5.0kb downstream 5.0kb downstream 5000 false Bd3: 45904946-45909945 Brachypodium distachyon
Bradi3g44341 10.0kb upstream 10.0kb upstream 16687 true Bd3: 45909946-45926632 Brachypodium distachyon
Bradi3g44341 10.0kb upstream 10.0kb upstream 10000 false Bd3: 45916633-45926632 Brachypodium distachyon
Bradi3g44341 10.0kb downstream 10.0kb downstream 16687 true Bd3: 45899946-45916632 Brachypodium distachyon
Bradi3g44341 10.0kb downstream 10.0kb downstream 10000 false Bd3: 45899946-45909945 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581910 5269 Grass View MSA
122047694 5273 Angiosperm View MSA
121345923 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.459     High  
cufflinks 40.173     High High
cufflinks 39.554     High High
cufflinks 34.294     High  
cufflinks 14.211     High Low
cufflinks 36.413     High  
cufflinks 33.257     High  
cufflinks 24.723     High  
cufflinks 31.36     High  
cufflinks 18.062     High  
cufflinks 41.46     High High
cufflinks 37.972     High High
cufflinks 29.496     High  
cufflinks 32.453     High  
cufflinks 22.039     High  
cufflinks 39.816     High High
cufflinks 16.622     High  
cufflinks 16.046     High Low
cufflinks 12.538       Low
cufflinks 15.988     High Low
cufflinks 17.027     High  
cufflinks 32.066     High  
cufflinks 24.263     High  
cufflinks 28.229     High  
cufflinks 28.494     High  
cufflinks 31.046     High  
cufflinks 26.868     High  
cufflinks 27.306     High  
cufflinks 28.088     High  
cufflinks 31.365     High  

0 Strain