Gene : Bradi3g41680 B. distachyon v3.1
Defline:  (1 of 1) PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN Genomic Order:  5140
Name:  ? Bradi3g41680 Secondary Identifier:  ? PAC:32818235
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g41680 0.5kb upstream 0.5kb upstream 4685 true Bd3: 43302994-43307678 Brachypodium distachyon
Bradi3g41680 0.5kb upstream 0.5kb upstream 500 false Bd3: 43302994-43303493 Brachypodium distachyon
Bradi3g41680 0.5kb downstream 0.5kb downstream 4685 true Bd3: 43303494-43308178 Brachypodium distachyon
Bradi3g41680 0.5kb downstream 0.5kb downstream 500 false Bd3: 43307679-43308178 Brachypodium distachyon
Bradi3g41680 1.0kb upstream 1.0kb upstream 5185 true Bd3: 43302494-43307678 Brachypodium distachyon
Bradi3g41680 1.0kb upstream 1.0kb upstream 1000 false Bd3: 43302494-43303493 Brachypodium distachyon
Bradi3g41680 1.0kb downstream 1.0kb downstream 5185 true Bd3: 43303494-43308678 Brachypodium distachyon
Bradi3g41680 1.0kb downstream 1.0kb downstream 1000 false Bd3: 43307679-43308678 Brachypodium distachyon
Bradi3g41680 2.0kb upstream 2.0kb upstream 6185 true Bd3: 43301494-43307678 Brachypodium distachyon
Bradi3g41680 2.0kb upstream 2.0kb upstream 2000 false Bd3: 43301494-43303493 Brachypodium distachyon
Bradi3g41680 2.0kb downstream 2.0kb downstream 6185 true Bd3: 43303494-43309678 Brachypodium distachyon
Bradi3g41680 2.0kb downstream 2.0kb downstream 2000 false Bd3: 43307679-43309678 Brachypodium distachyon
Bradi3g41680 5.0kb upstream 5.0kb upstream 9185 true Bd3: 43298494-43307678 Brachypodium distachyon
Bradi3g41680 5.0kb upstream 5.0kb upstream 5000 false Bd3: 43298494-43303493 Brachypodium distachyon
Bradi3g41680 5.0kb downstream 5.0kb downstream 9185 true Bd3: 43303494-43312678 Brachypodium distachyon
Bradi3g41680 5.0kb downstream 5.0kb downstream 5000 false Bd3: 43307679-43312678 Brachypodium distachyon
Bradi3g41680 10.0kb upstream 10.0kb upstream 14185 true Bd3: 43293494-43307678 Brachypodium distachyon
Bradi3g41680 10.0kb upstream 10.0kb upstream 10000 false Bd3: 43293494-43303493 Brachypodium distachyon
Bradi3g41680 10.0kb downstream 10.0kb downstream 14185 true Bd3: 43303494-43317678 Brachypodium distachyon
Bradi3g41680 10.0kb downstream 10.0kb downstream 10000 false Bd3: 43307679-43317678 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576907 5269 Grass View MSA
122049263 5273 Angiosperm View MSA
121311321 5274 Embryophyte View MSA
123348631 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.006     Low  
cufflinks 0.007     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.071     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.016     Low  
cufflinks 5.211       High
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.005     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain