Gene : Bradi3g42340 B. distachyon v3.1
Defline:  (1 of 1) PTHR31356//PTHR31356:SF9 - FAMILY NOT NAMED // L-ASCORBATE PEROXIDASE 3, PEROXISOMAL Genomic Order:  5222
Name:  ? Bradi3g42340 Secondary Identifier:  ? PAC:32816105
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-2261 Brachypodium distachyon pathologic  
Bdistachyon PWY-6959 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g42340 0.5kb upstream 0.5kb upstream 4225 true Bd3: 43763733-43767957 Brachypodium distachyon
Bradi3g42340 0.5kb upstream 0.5kb upstream 500 false Bd3: 43763733-43764232 Brachypodium distachyon
Bradi3g42340 0.5kb downstream 0.5kb downstream 4225 true Bd3: 43764233-43768457 Brachypodium distachyon
Bradi3g42340 0.5kb downstream 0.5kb downstream 500 false Bd3: 43767958-43768457 Brachypodium distachyon
Bradi3g42340 1.0kb upstream 1.0kb upstream 4725 true Bd3: 43763233-43767957 Brachypodium distachyon
Bradi3g42340 1.0kb upstream 1.0kb upstream 1000 false Bd3: 43763233-43764232 Brachypodium distachyon
Bradi3g42340 1.0kb downstream 1.0kb downstream 4725 true Bd3: 43764233-43768957 Brachypodium distachyon
Bradi3g42340 1.0kb downstream 1.0kb downstream 1000 false Bd3: 43767958-43768957 Brachypodium distachyon
Bradi3g42340 2.0kb upstream 2.0kb upstream 5725 true Bd3: 43762233-43767957 Brachypodium distachyon
Bradi3g42340 2.0kb upstream 2.0kb upstream 2000 false Bd3: 43762233-43764232 Brachypodium distachyon
Bradi3g42340 2.0kb downstream 2.0kb downstream 5725 true Bd3: 43764233-43769957 Brachypodium distachyon
Bradi3g42340 2.0kb downstream 2.0kb downstream 2000 false Bd3: 43767958-43769957 Brachypodium distachyon
Bradi3g42340 5.0kb upstream 5.0kb upstream 8725 true Bd3: 43759233-43767957 Brachypodium distachyon
Bradi3g42340 5.0kb upstream 5.0kb upstream 5000 false Bd3: 43759233-43764232 Brachypodium distachyon
Bradi3g42340 5.0kb downstream 5.0kb downstream 8725 true Bd3: 43764233-43772957 Brachypodium distachyon
Bradi3g42340 5.0kb downstream 5.0kb downstream 5000 false Bd3: 43767958-43772957 Brachypodium distachyon
Bradi3g42340 10.0kb upstream 10.0kb upstream 13725 true Bd3: 43754233-43767957 Brachypodium distachyon
Bradi3g42340 10.0kb upstream 10.0kb upstream 10000 false Bd3: 43754233-43764232 Brachypodium distachyon
Bradi3g42340 10.0kb downstream 10.0kb downstream 13725 true Bd3: 43764233-43777957 Brachypodium distachyon
Bradi3g42340 10.0kb downstream 10.0kb downstream 10000 false Bd3: 43767958-43777957 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583680 5269 Grass View MSA
122047258 5273 Angiosperm View MSA
121344023 5274 Embryophyte View MSA
123426233 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 123.25     High  
cufflinks 134.151     High  
cufflinks 179.001     High  
cufflinks 174.807     High  
cufflinks 111.118     High  
cufflinks 139.799     High  
cufflinks 136.391     High  
cufflinks 161.012     High  
cufflinks 144.892     High  
cufflinks 238.733     High High
cufflinks 244.211     High High
cufflinks 128.176     High  
cufflinks 185.327     High  
cufflinks 216.402     High  
cufflinks 149.172     High  
cufflinks 127.647     High  
cufflinks 135.148     High  
cufflinks 27.04     High Low
cufflinks 104.351     High  
cufflinks 105.383     High  
cufflinks 89.016     High  
cufflinks 184.463     High  
cufflinks 156.786     High  
cufflinks 147.571     High  
cufflinks 146.991     High  
cufflinks 241.335     High High
cufflinks 216.649     High  
cufflinks 246.611     High High
cufflinks 219.951     High  
cufflinks 66.909     High Low

0 Strain