Gene : Bradi3g42670 B. distachyon v3.1
Defline:  (1 of 2) K13338 - peroxin-1 (PEX1) Genomic Order:  5259
Name:  ? Bradi3g42670 Secondary Identifier:  ? PAC:32812926
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g42670 0.5kb upstream 0.5kb upstream 8222 true Bd3: 43902666-43910887 Brachypodium distachyon
Bradi3g42670 0.5kb upstream 0.5kb upstream 500 false Bd3: 43902666-43903165 Brachypodium distachyon
Bradi3g42670 0.5kb downstream 0.5kb downstream 8222 true Bd3: 43903166-43911387 Brachypodium distachyon
Bradi3g42670 0.5kb downstream 0.5kb downstream 500 false Bd3: 43910888-43911387 Brachypodium distachyon
Bradi3g42670 1.0kb upstream 1.0kb upstream 8722 true Bd3: 43902166-43910887 Brachypodium distachyon
Bradi3g42670 1.0kb upstream 1.0kb upstream 1000 false Bd3: 43902166-43903165 Brachypodium distachyon
Bradi3g42670 1.0kb downstream 1.0kb downstream 8722 true Bd3: 43903166-43911887 Brachypodium distachyon
Bradi3g42670 1.0kb downstream 1.0kb downstream 1000 false Bd3: 43910888-43911887 Brachypodium distachyon
Bradi3g42670 2.0kb upstream 2.0kb upstream 9722 true Bd3: 43901166-43910887 Brachypodium distachyon
Bradi3g42670 2.0kb upstream 2.0kb upstream 2000 false Bd3: 43901166-43903165 Brachypodium distachyon
Bradi3g42670 2.0kb downstream 2.0kb downstream 9722 true Bd3: 43903166-43912887 Brachypodium distachyon
Bradi3g42670 2.0kb downstream 2.0kb downstream 2000 false Bd3: 43910888-43912887 Brachypodium distachyon
Bradi3g42670 5.0kb upstream 5.0kb upstream 12722 true Bd3: 43898166-43910887 Brachypodium distachyon
Bradi3g42670 5.0kb upstream 5.0kb upstream 5000 false Bd3: 43898166-43903165 Brachypodium distachyon
Bradi3g42670 5.0kb downstream 5.0kb downstream 12722 true Bd3: 43903166-43915887 Brachypodium distachyon
Bradi3g42670 5.0kb downstream 5.0kb downstream 5000 false Bd3: 43910888-43915887 Brachypodium distachyon
Bradi3g42670 10.0kb upstream 10.0kb upstream 17722 true Bd3: 43893166-43910887 Brachypodium distachyon
Bradi3g42670 10.0kb upstream 10.0kb upstream 10000 false Bd3: 43893166-43903165 Brachypodium distachyon
Bradi3g42670 10.0kb downstream 10.0kb downstream 17722 true Bd3: 43903166-43920887 Brachypodium distachyon
Bradi3g42670 10.0kb downstream 10.0kb downstream 10000 false Bd3: 43910888-43920887 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580328 5269 Grass View MSA
122044173 5273 Angiosperm View MSA
121346110 5274 Embryophyte View MSA
123424996 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.003        
cufflinks 3.4        
cufflinks 3.807        
cufflinks 2.769        
cufflinks 1.522       Low
cufflinks 3.066        
cufflinks 2.753        
cufflinks 2.696        
cufflinks 3.266        
cufflinks 2.712        
cufflinks 3.963       High
cufflinks 3.246        
cufflinks 3.152        
cufflinks 2.805        
cufflinks 2.012        
cufflinks 3.187        
cufflinks 2.005        
cufflinks 4.205       High
cufflinks 2.314        
cufflinks 0.777       Low
cufflinks 1.71       Low
cufflinks 4.501       High
cufflinks 2.597        
cufflinks 2.571        
cufflinks 2.377        
cufflinks 3.553        
cufflinks 4.092       High
cufflinks 3.869        
cufflinks 3.664        
cufflinks 2.23        

0 Strain