Gene : Bradi3g47400 B. distachyon v3.1
Defline:  (1 of 1) K14820 - ribosome biogenesis protein BRX1 (BRX1, BRIX1) Genomic Order:  5876
Name:  ? Bradi3g47400 Secondary Identifier:  ? PAC:32817210
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g47400 0.5kb upstream 0.5kb upstream 4037 true Bd3: 48791580-48795616 Brachypodium distachyon
Bradi3g47400 0.5kb upstream 0.5kb upstream 500 false Bd3: 48791580-48792079 Brachypodium distachyon
Bradi3g47400 0.5kb downstream 0.5kb downstream 4037 true Bd3: 48792080-48796116 Brachypodium distachyon
Bradi3g47400 0.5kb downstream 0.5kb downstream 500 false Bd3: 48795617-48796116 Brachypodium distachyon
Bradi3g47400 1.0kb upstream 1.0kb upstream 4537 true Bd3: 48791080-48795616 Brachypodium distachyon
Bradi3g47400 1.0kb upstream 1.0kb upstream 1000 false Bd3: 48791080-48792079 Brachypodium distachyon
Bradi3g47400 1.0kb downstream 1.0kb downstream 4537 true Bd3: 48792080-48796616 Brachypodium distachyon
Bradi3g47400 1.0kb downstream 1.0kb downstream 1000 false Bd3: 48795617-48796616 Brachypodium distachyon
Bradi3g47400 2.0kb upstream 2.0kb upstream 5537 true Bd3: 48790080-48795616 Brachypodium distachyon
Bradi3g47400 2.0kb upstream 2.0kb upstream 2000 false Bd3: 48790080-48792079 Brachypodium distachyon
Bradi3g47400 2.0kb downstream 2.0kb downstream 5537 true Bd3: 48792080-48797616 Brachypodium distachyon
Bradi3g47400 2.0kb downstream 2.0kb downstream 2000 false Bd3: 48795617-48797616 Brachypodium distachyon
Bradi3g47400 5.0kb upstream 5.0kb upstream 8537 true Bd3: 48787080-48795616 Brachypodium distachyon
Bradi3g47400 5.0kb upstream 5.0kb upstream 5000 false Bd3: 48787080-48792079 Brachypodium distachyon
Bradi3g47400 5.0kb downstream 5.0kb downstream 8537 true Bd3: 48792080-48800616 Brachypodium distachyon
Bradi3g47400 5.0kb downstream 5.0kb downstream 5000 false Bd3: 48795617-48800616 Brachypodium distachyon
Bradi3g47400 10.0kb upstream 10.0kb upstream 13537 true Bd3: 48782080-48795616 Brachypodium distachyon
Bradi3g47400 10.0kb upstream 10.0kb upstream 10000 false Bd3: 48782080-48792079 Brachypodium distachyon
Bradi3g47400 10.0kb downstream 10.0kb downstream 13537 true Bd3: 48792080-48805616 Brachypodium distachyon
Bradi3g47400 10.0kb downstream 10.0kb downstream 10000 false Bd3: 48795617-48805616 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568811 5269 Grass View MSA
122044943 5273 Angiosperm View MSA
121349152 5274 Embryophyte View MSA
123424371 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.518     High  
cufflinks 10.59     High  
cufflinks 7.893        
cufflinks 9.878        
cufflinks 5.273        
cufflinks 9.669     High  
cufflinks 10.884     High  
cufflinks 8.655        
cufflinks 8.634        
cufflinks 5.282        
cufflinks 3.056       Low
cufflinks 5.693        
cufflinks 1.651       Low
cufflinks 2.485       Low
cufflinks 4.992        
cufflinks 10.055     High  
cufflinks 9.442        
cufflinks 18.485     High High
cufflinks 7.581        
cufflinks 1.801       Low
cufflinks 10.037        
cufflinks 6.754        
cufflinks 7.819        
cufflinks 7.745        
cufflinks 9.869     High  
cufflinks 5.578        
cufflinks 2.633       Low
cufflinks 5.162        
cufflinks 5.572        
cufflinks 9.642        

0 Strain