Gene : Bradi3g47370 B. distachyon v3.1
Defline:  (1 of 3) PTHR24362//PTHR24362:SF258 - SERINE/THREONINE-PROTEIN KINASE NEK // SERINE/THREONINE-PROTEIN KINASE NEK5 Genomic Order:  5869
Name:  ? Bradi3g47370 Secondary Identifier:  ? PAC:32813616
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g47370 0.5kb upstream 0.5kb upstream 4224 true Bd3: 48751864-48756087 Brachypodium distachyon
Bradi3g47370 0.5kb upstream 0.5kb upstream 500 false Bd3: 48755588-48756087 Brachypodium distachyon
Bradi3g47370 0.5kb downstream 0.5kb downstream 4224 true Bd3: 48751364-48755587 Brachypodium distachyon
Bradi3g47370 0.5kb downstream 0.5kb downstream 500 false Bd3: 48751364-48751863 Brachypodium distachyon
Bradi3g47370 1.0kb upstream 1.0kb upstream 4724 true Bd3: 48751864-48756587 Brachypodium distachyon
Bradi3g47370 1.0kb upstream 1.0kb upstream 1000 false Bd3: 48755588-48756587 Brachypodium distachyon
Bradi3g47370 1.0kb downstream 1.0kb downstream 4724 true Bd3: 48750864-48755587 Brachypodium distachyon
Bradi3g47370 1.0kb downstream 1.0kb downstream 1000 false Bd3: 48750864-48751863 Brachypodium distachyon
Bradi3g47370 2.0kb upstream 2.0kb upstream 5724 true Bd3: 48751864-48757587 Brachypodium distachyon
Bradi3g47370 2.0kb upstream 2.0kb upstream 2000 false Bd3: 48755588-48757587 Brachypodium distachyon
Bradi3g47370 2.0kb downstream 2.0kb downstream 5724 true Bd3: 48749864-48755587 Brachypodium distachyon
Bradi3g47370 2.0kb downstream 2.0kb downstream 2000 false Bd3: 48749864-48751863 Brachypodium distachyon
Bradi3g47370 5.0kb upstream 5.0kb upstream 8724 true Bd3: 48751864-48760587 Brachypodium distachyon
Bradi3g47370 5.0kb upstream 5.0kb upstream 5000 false Bd3: 48755588-48760587 Brachypodium distachyon
Bradi3g47370 5.0kb downstream 5.0kb downstream 8724 true Bd3: 48746864-48755587 Brachypodium distachyon
Bradi3g47370 5.0kb downstream 5.0kb downstream 5000 false Bd3: 48746864-48751863 Brachypodium distachyon
Bradi3g47370 10.0kb upstream 10.0kb upstream 13724 true Bd3: 48751864-48765587 Brachypodium distachyon
Bradi3g47370 10.0kb upstream 10.0kb upstream 10000 false Bd3: 48755588-48765587 Brachypodium distachyon
Bradi3g47370 10.0kb downstream 10.0kb downstream 13724 true Bd3: 48741864-48755587 Brachypodium distachyon
Bradi3g47370 10.0kb downstream 10.0kb downstream 10000 false Bd3: 48741864-48751863 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568412 5269 Grass View MSA
122049152 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351770 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.856     High  
cufflinks 25.273     High  
cufflinks 43.162     High  
cufflinks 26.975     High  
cufflinks 65.785     High High
cufflinks 26.371     High  
cufflinks 22.69     High  
cufflinks 31.756     High  
cufflinks 28.09     High  
cufflinks 39.704     High  
cufflinks 16.941     High Low
cufflinks 40.402     High  
cufflinks 26.528     High  
cufflinks 12.388     High Low
cufflinks 49.798     High High
cufflinks 26.947     High  
cufflinks 30.618     High  
cufflinks 33.735     High  
cufflinks 40.204     High  
cufflinks 52.445     High High
cufflinks 50.726     High High
cufflinks 38.655     High  
cufflinks 28.714     High  
cufflinks 30.589     High  
cufflinks 24.77     High  
cufflinks 41.298     High  
cufflinks 20.191     High Low
cufflinks 40.301     High  
cufflinks 38.115     High  
cufflinks 62.345     High High

0 Strain