Gene : Bradi3g47880 B. distachyon v3.1
Defline:  (1 of 2) K03037 - 26S proteasome regulatory subunit N7 (PSMD6, RPN7) Genomic Order:  5939
Name:  ? Bradi3g47880 Secondary Identifier:  ? PAC:32822870
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g47880 0.5kb upstream 0.5kb upstream 3476 true Bd3: 49212748-49216223 Brachypodium distachyon
Bradi3g47880 0.5kb upstream 0.5kb upstream 500 false Bd3: 49212748-49213247 Brachypodium distachyon
Bradi3g47880 0.5kb downstream 0.5kb downstream 3476 true Bd3: 49213248-49216723 Brachypodium distachyon
Bradi3g47880 0.5kb downstream 0.5kb downstream 500 false Bd3: 49216224-49216723 Brachypodium distachyon
Bradi3g47880 1.0kb upstream 1.0kb upstream 3976 true Bd3: 49212248-49216223 Brachypodium distachyon
Bradi3g47880 1.0kb upstream 1.0kb upstream 1000 false Bd3: 49212248-49213247 Brachypodium distachyon
Bradi3g47880 1.0kb downstream 1.0kb downstream 3976 true Bd3: 49213248-49217223 Brachypodium distachyon
Bradi3g47880 1.0kb downstream 1.0kb downstream 1000 false Bd3: 49216224-49217223 Brachypodium distachyon
Bradi3g47880 2.0kb upstream 2.0kb upstream 4976 true Bd3: 49211248-49216223 Brachypodium distachyon
Bradi3g47880 2.0kb upstream 2.0kb upstream 2000 false Bd3: 49211248-49213247 Brachypodium distachyon
Bradi3g47880 2.0kb downstream 2.0kb downstream 4976 true Bd3: 49213248-49218223 Brachypodium distachyon
Bradi3g47880 2.0kb downstream 2.0kb downstream 2000 false Bd3: 49216224-49218223 Brachypodium distachyon
Bradi3g47880 5.0kb upstream 5.0kb upstream 7976 true Bd3: 49208248-49216223 Brachypodium distachyon
Bradi3g47880 5.0kb upstream 5.0kb upstream 5000 false Bd3: 49208248-49213247 Brachypodium distachyon
Bradi3g47880 5.0kb downstream 5.0kb downstream 7976 true Bd3: 49213248-49221223 Brachypodium distachyon
Bradi3g47880 5.0kb downstream 5.0kb downstream 5000 false Bd3: 49216224-49221223 Brachypodium distachyon
Bradi3g47880 10.0kb upstream 10.0kb upstream 12976 true Bd3: 49203248-49216223 Brachypodium distachyon
Bradi3g47880 10.0kb upstream 10.0kb upstream 10000 false Bd3: 49203248-49213247 Brachypodium distachyon
Bradi3g47880 10.0kb downstream 10.0kb downstream 12976 true Bd3: 49213248-49226223 Brachypodium distachyon
Bradi3g47880 10.0kb downstream 10.0kb downstream 10000 false Bd3: 49216224-49226223 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584685 5269 Grass View MSA
122047339 5273 Angiosperm View MSA
121344552 5274 Embryophyte View MSA
123425003 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.921     High  
cufflinks 19.558     High  
cufflinks 19.476     High  
cufflinks 21.567     High  
cufflinks 18.356     High  
cufflinks 17.788     High  
cufflinks 18.54     High  
cufflinks 16.595     High  
cufflinks 17.078     High  
cufflinks 18.838     High  
cufflinks 8.532       Low
cufflinks 17.642     High  
cufflinks 6.764       Low
cufflinks 6.739       Low
cufflinks 13.949     High  
cufflinks 17.877     High  
cufflinks 26.232     High  
cufflinks 41.212     High High
cufflinks 29.549     High High
cufflinks 27.146     High  
cufflinks 33.996     High High
cufflinks 18.268     High  
cufflinks 16.147     High  
cufflinks 18.059     High  
cufflinks 19.188     High  
cufflinks 20.548     High  
cufflinks 10.743     High Low
cufflinks 18.61     High  
cufflinks 17.995     High  
cufflinks 32.853     High High

0 Strain