Gene : Bradi3g45690 B. distachyon v3.1
Defline:  (1 of 1) K03660 - N-glycosylase/DNA lyase (OGG1) Genomic Order:  5667
Name:  ? Bradi3g45690 Secondary Identifier:  ? PAC:32821962
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g45690 0.5kb upstream 0.5kb upstream 7336 true Bd3: 47452965-47460300 Brachypodium distachyon
Bradi3g45690 0.5kb upstream 0.5kb upstream 500 false Bd3: 47459801-47460300 Brachypodium distachyon
Bradi3g45690 0.5kb downstream 0.5kb downstream 7336 true Bd3: 47452465-47459800 Brachypodium distachyon
Bradi3g45690 0.5kb downstream 0.5kb downstream 500 false Bd3: 47452465-47452964 Brachypodium distachyon
Bradi3g45690 1.0kb upstream 1.0kb upstream 7836 true Bd3: 47452965-47460800 Brachypodium distachyon
Bradi3g45690 1.0kb upstream 1.0kb upstream 1000 false Bd3: 47459801-47460800 Brachypodium distachyon
Bradi3g45690 1.0kb downstream 1.0kb downstream 7836 true Bd3: 47451965-47459800 Brachypodium distachyon
Bradi3g45690 1.0kb downstream 1.0kb downstream 1000 false Bd3: 47451965-47452964 Brachypodium distachyon
Bradi3g45690 2.0kb upstream 2.0kb upstream 8836 true Bd3: 47452965-47461800 Brachypodium distachyon
Bradi3g45690 2.0kb upstream 2.0kb upstream 2000 false Bd3: 47459801-47461800 Brachypodium distachyon
Bradi3g45690 2.0kb downstream 2.0kb downstream 8836 true Bd3: 47450965-47459800 Brachypodium distachyon
Bradi3g45690 2.0kb downstream 2.0kb downstream 2000 false Bd3: 47450965-47452964 Brachypodium distachyon
Bradi3g45690 5.0kb upstream 5.0kb upstream 11836 true Bd3: 47452965-47464800 Brachypodium distachyon
Bradi3g45690 5.0kb upstream 5.0kb upstream 5000 false Bd3: 47459801-47464800 Brachypodium distachyon
Bradi3g45690 5.0kb downstream 5.0kb downstream 11836 true Bd3: 47447965-47459800 Brachypodium distachyon
Bradi3g45690 5.0kb downstream 5.0kb downstream 5000 false Bd3: 47447965-47452964 Brachypodium distachyon
Bradi3g45690 10.0kb upstream 10.0kb upstream 16836 true Bd3: 47452965-47469800 Brachypodium distachyon
Bradi3g45690 10.0kb upstream 10.0kb upstream 10000 false Bd3: 47459801-47469800 Brachypodium distachyon
Bradi3g45690 10.0kb downstream 10.0kb downstream 16836 true Bd3: 47442965-47459800 Brachypodium distachyon
Bradi3g45690 10.0kb downstream 10.0kb downstream 10000 false Bd3: 47442965-47452964 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581269 5269 Grass View MSA
122046442 5273 Angiosperm View MSA
121344747 5274 Embryophyte View MSA
123428453 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.568        
cufflinks 1.847        
cufflinks 1.855        
cufflinks 1.742        
cufflinks 0.98       Low
cufflinks 1.634        
cufflinks 1.781        
cufflinks 1.708        
cufflinks 1.614        
cufflinks 1.966        
cufflinks 1.311        
cufflinks 1.314        
cufflinks 1.28        
cufflinks 1.168       Low
cufflinks 1.373        
cufflinks 1.65        
cufflinks 1.998        
cufflinks 2.494       High
cufflinks 1.77        
cufflinks 0.637       Low
cufflinks 2.778       High
cufflinks 1.728        
cufflinks 1.565        
cufflinks 1.675        
cufflinks 1.585        
cufflinks 2.208        
cufflinks 1.722        
cufflinks 1.947        
cufflinks 1.779        
cufflinks 2.298       High

0 Strain