Gene : Bradi3g52210 B. distachyon v3.1
Defline:  (1 of 6) KOG1865 - Ubiquitin carboxyl-terminal hydrolase Genomic Order:  6490
Name:  ? Bradi3g52210 Secondary Identifier:  ? PAC:32817220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g52210 0.5kb upstream 0.5kb upstream 6144 true Bd3: 52951234-52957377 Brachypodium distachyon
Bradi3g52210 0.5kb upstream 0.5kb upstream 500 false Bd3: 52951234-52951733 Brachypodium distachyon
Bradi3g52210 0.5kb downstream 0.5kb downstream 6144 true Bd3: 52951734-52957877 Brachypodium distachyon
Bradi3g52210 0.5kb downstream 0.5kb downstream 500 false Bd3: 52957378-52957877 Brachypodium distachyon
Bradi3g52210 1.0kb upstream 1.0kb upstream 6644 true Bd3: 52950734-52957377 Brachypodium distachyon
Bradi3g52210 1.0kb upstream 1.0kb upstream 1000 false Bd3: 52950734-52951733 Brachypodium distachyon
Bradi3g52210 1.0kb downstream 1.0kb downstream 6644 true Bd3: 52951734-52958377 Brachypodium distachyon
Bradi3g52210 1.0kb downstream 1.0kb downstream 1000 false Bd3: 52957378-52958377 Brachypodium distachyon
Bradi3g52210 2.0kb upstream 2.0kb upstream 7644 true Bd3: 52949734-52957377 Brachypodium distachyon
Bradi3g52210 2.0kb upstream 2.0kb upstream 2000 false Bd3: 52949734-52951733 Brachypodium distachyon
Bradi3g52210 2.0kb downstream 2.0kb downstream 7644 true Bd3: 52951734-52959377 Brachypodium distachyon
Bradi3g52210 2.0kb downstream 2.0kb downstream 2000 false Bd3: 52957378-52959377 Brachypodium distachyon
Bradi3g52210 5.0kb upstream 5.0kb upstream 10644 true Bd3: 52946734-52957377 Brachypodium distachyon
Bradi3g52210 5.0kb upstream 5.0kb upstream 5000 false Bd3: 52946734-52951733 Brachypodium distachyon
Bradi3g52210 5.0kb downstream 5.0kb downstream 10644 true Bd3: 52951734-52962377 Brachypodium distachyon
Bradi3g52210 5.0kb downstream 5.0kb downstream 5000 false Bd3: 52957378-52962377 Brachypodium distachyon
Bradi3g52210 10.0kb upstream 10.0kb upstream 15644 true Bd3: 52941734-52957377 Brachypodium distachyon
Bradi3g52210 10.0kb upstream 10.0kb upstream 10000 false Bd3: 52941734-52951733 Brachypodium distachyon
Bradi3g52210 10.0kb downstream 10.0kb downstream 15644 true Bd3: 52951734-52967377 Brachypodium distachyon
Bradi3g52210 10.0kb downstream 10.0kb downstream 10000 false Bd3: 52957378-52967377 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582193 5269 Grass View MSA
122046494 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.502        
cufflinks 1.286        
cufflinks 1.07        
cufflinks 0.953        
cufflinks 0.177        
cufflinks 1.092        
cufflinks 0.987        
cufflinks 0.934        
cufflinks 1.236        
cufflinks 0.522        
cufflinks 0.028     Low Low
cufflinks 0.922        
cufflinks 0.047     Low Low
cufflinks 0.031     Low Low
cufflinks 0.216        
cufflinks 1.169        
cufflinks 0.61        
cufflinks 2.275       High
cufflinks 0.289        
cufflinks 0.042     Low Low
cufflinks 0.518        
cufflinks 1.108        
cufflinks 0.599        
cufflinks 0.77        
cufflinks 0.792        
cufflinks 0.582        
cufflinks 0.035     Low Low
cufflinks 0.642        
cufflinks 0.789        
cufflinks 1.17        

0 Strain