Gene : Bradi3g52437 B. distachyon v3.1
Defline:  (1 of 1) PTHR21262//PTHR21262:SF7 - GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE Genomic Order:  6514
Name:  ? Bradi3g52437 Secondary Identifier:  ? PAC:32822420
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g52437 0.5kb upstream 0.5kb upstream 9468 true Bd3: 53096347-53105814 Brachypodium distachyon
Bradi3g52437 0.5kb upstream 0.5kb upstream 500 false Bd3: 53096347-53096846 Brachypodium distachyon
Bradi3g52437 0.5kb downstream 0.5kb downstream 9468 true Bd3: 53096847-53106314 Brachypodium distachyon
Bradi3g52437 0.5kb downstream 0.5kb downstream 500 false Bd3: 53105815-53106314 Brachypodium distachyon
Bradi3g52437 1.0kb upstream 1.0kb upstream 9968 true Bd3: 53095847-53105814 Brachypodium distachyon
Bradi3g52437 1.0kb upstream 1.0kb upstream 1000 false Bd3: 53095847-53096846 Brachypodium distachyon
Bradi3g52437 1.0kb downstream 1.0kb downstream 9968 true Bd3: 53096847-53106814 Brachypodium distachyon
Bradi3g52437 1.0kb downstream 1.0kb downstream 1000 false Bd3: 53105815-53106814 Brachypodium distachyon
Bradi3g52437 2.0kb upstream 2.0kb upstream 10968 true Bd3: 53094847-53105814 Brachypodium distachyon
Bradi3g52437 2.0kb upstream 2.0kb upstream 2000 false Bd3: 53094847-53096846 Brachypodium distachyon
Bradi3g52437 2.0kb downstream 2.0kb downstream 10968 true Bd3: 53096847-53107814 Brachypodium distachyon
Bradi3g52437 2.0kb downstream 2.0kb downstream 2000 false Bd3: 53105815-53107814 Brachypodium distachyon
Bradi3g52437 5.0kb upstream 5.0kb upstream 13968 true Bd3: 53091847-53105814 Brachypodium distachyon
Bradi3g52437 5.0kb upstream 5.0kb upstream 5000 false Bd3: 53091847-53096846 Brachypodium distachyon
Bradi3g52437 5.0kb downstream 5.0kb downstream 13968 true Bd3: 53096847-53110814 Brachypodium distachyon
Bradi3g52437 5.0kb downstream 5.0kb downstream 5000 false Bd3: 53105815-53110814 Brachypodium distachyon
Bradi3g52437 10.0kb upstream 10.0kb upstream 18968 true Bd3: 53086847-53105814 Brachypodium distachyon
Bradi3g52437 10.0kb upstream 10.0kb upstream 10000 false Bd3: 53086847-53096846 Brachypodium distachyon
Bradi3g52437 10.0kb downstream 10.0kb downstream 18968 true Bd3: 53096847-53115814 Brachypodium distachyon
Bradi3g52437 10.0kb downstream 10.0kb downstream 10000 false Bd3: 53105815-53115814 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575485 5269 Grass View MSA
122048422 5273 Angiosperm View MSA
121348424 5274 Embryophyte View MSA
123425764 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.156     High  
cufflinks 14.839     High  
cufflinks 35.128     High High
cufflinks 16.231     High  
cufflinks 8.0        
cufflinks 15.329     High  
cufflinks 11.783     High  
cufflinks 16.82     High  
cufflinks 16.094     High  
cufflinks 35.014     High High
cufflinks 33.869     High High
cufflinks 16.155     High  
cufflinks 27.589     High  
cufflinks 28.161     High  
cufflinks 18.835     High  
cufflinks 16.56     High  
cufflinks 11.584     High  
cufflinks 2.491       Low
cufflinks 6.061       Low
cufflinks 5.608       Low
cufflinks 6.062       Low
cufflinks 44.553     High High
cufflinks 16.091     High  
cufflinks 14.741     High  
cufflinks 12.506     High  
cufflinks 39.062     High High
cufflinks 37.973     High High
cufflinks 42.968     High High
cufflinks 42.182     High High
cufflinks 5.179       Low

0 Strain