Gene : Bradi3g52690 B. distachyon v3.1
Defline:  (1 of 1) PTHR10887//PTHR10887:SF361 - DNA2/NAM7 HELICASE FAMILY // SUBFAMILY NOT NAMED Genomic Order:  6542
Name:  ? Bradi3g52690 Secondary Identifier:  ? PAC:32817887
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g52690 0.5kb upstream 0.5kb upstream 7975 true Bd3: 53312434-53320408 Brachypodium distachyon
Bradi3g52690 0.5kb upstream 0.5kb upstream 500 false Bd3: 53319909-53320408 Brachypodium distachyon
Bradi3g52690 0.5kb downstream 0.5kb downstream 7975 true Bd3: 53311934-53319908 Brachypodium distachyon
Bradi3g52690 0.5kb downstream 0.5kb downstream 500 false Bd3: 53311934-53312433 Brachypodium distachyon
Bradi3g52690 1.0kb upstream 1.0kb upstream 8475 true Bd3: 53312434-53320908 Brachypodium distachyon
Bradi3g52690 1.0kb upstream 1.0kb upstream 1000 false Bd3: 53319909-53320908 Brachypodium distachyon
Bradi3g52690 1.0kb downstream 1.0kb downstream 8475 true Bd3: 53311434-53319908 Brachypodium distachyon
Bradi3g52690 1.0kb downstream 1.0kb downstream 1000 false Bd3: 53311434-53312433 Brachypodium distachyon
Bradi3g52690 2.0kb upstream 2.0kb upstream 9475 true Bd3: 53312434-53321908 Brachypodium distachyon
Bradi3g52690 2.0kb upstream 2.0kb upstream 2000 false Bd3: 53319909-53321908 Brachypodium distachyon
Bradi3g52690 2.0kb downstream 2.0kb downstream 9475 true Bd3: 53310434-53319908 Brachypodium distachyon
Bradi3g52690 2.0kb downstream 2.0kb downstream 2000 false Bd3: 53310434-53312433 Brachypodium distachyon
Bradi3g52690 5.0kb upstream 5.0kb upstream 12475 true Bd3: 53312434-53324908 Brachypodium distachyon
Bradi3g52690 5.0kb upstream 5.0kb upstream 5000 false Bd3: 53319909-53324908 Brachypodium distachyon
Bradi3g52690 5.0kb downstream 5.0kb downstream 12475 true Bd3: 53307434-53319908 Brachypodium distachyon
Bradi3g52690 5.0kb downstream 5.0kb downstream 5000 false Bd3: 53307434-53312433 Brachypodium distachyon
Bradi3g52690 10.0kb upstream 10.0kb upstream 17475 true Bd3: 53312434-53329908 Brachypodium distachyon
Bradi3g52690 10.0kb upstream 10.0kb upstream 10000 false Bd3: 53319909-53329908 Brachypodium distachyon
Bradi3g52690 10.0kb downstream 10.0kb downstream 17475 true Bd3: 53302434-53319908 Brachypodium distachyon
Bradi3g52690 10.0kb downstream 10.0kb downstream 10000 false Bd3: 53302434-53312433 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584860 5269 Grass View MSA
122042970 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121344872 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.893       High
cufflinks 1.143        
cufflinks 0.527       Low
cufflinks 0.864        
cufflinks 2.861        
cufflinks 5.737        
cufflinks 2.321        
cufflinks 4.487        
cufflinks 5.873        
cufflinks 1.499        
cufflinks 10.27     High High
cufflinks 7.812       High
cufflinks 11.434     High High
cufflinks 11.698     High High
cufflinks 7.256       High
cufflinks 5.781        
cufflinks 3.506        
cufflinks 0.295       Low
cufflinks 1.144        
cufflinks 1.396        
cufflinks 0.393       Low
cufflinks 2.519        
cufflinks 4.641        
cufflinks 6.128        
cufflinks 4.251        
cufflinks 0.587       Low
cufflinks 7.341       High
cufflinks 0.794        
cufflinks 1.512        
cufflinks 0.497       Low

0 Strain